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SCNpilot_BF_INOC_scaffold_833

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_833_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..287)
DNA (285bp) protein (95aa)
thioesterase superfamily protein id=12550089 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
thioesterase superfamily protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
thioesterase superfamily protein
SCNpilot_BF_INOC_scaffold_833_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

372..2408
DNA (2037bp) protein (679aa)
Transketolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TW97_ALIDB
Transketolase {ECO:0000313|EMBL:ADV01871.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans
transketolase
SCNpilot_BF_INOC_scaffold_833_3
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2723..3100)
DNA (378bp) protein (126aa)
PREDICTED: uncharacterized protein LOC101055971 n=1 Tax=Mus musculus RepID=UPI000286A68C
similar to glyceraldehyde 3-phosphate dehydrogenase Tax=RBG_16_Gallionellales_56_9_curated
similar to glyceraldehyde 3-phosphate dehydrogenase
SCNpilot_BF_INOC_scaffold_833_4
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3202..3549
DNA (348bp) protein (116aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonad
Glyceraldehyde 3-phosphate dehydrogenase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SZQ3_XANCT
glyceraldehyde 3-phosphate dehydrogenase
SCNpilot_BF_INOC_scaffold_833_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3617..3925)
DNA (309bp) protein (103aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Variovorax paradoxus RepID=UPI00037AEB67
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35745.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
putative antibiotic biosynthesis monooxygenase
SCNpilot_BF_INOC_scaffold_833_6
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4097..5926
DNA (1830bp) protein (610aa)
Putative serine metalloprotease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG24_9BURK
peptidase S8/S53 subtilisin kexin sedolisin
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_833_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6055..6759)
DNA (705bp) protein (235aa)
hypothetical protein id=12550088 bin=BDI species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_833_8
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6769..7446)
DNA (678bp) protein (226aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=2 Tax=Delftia RepID=F6AQ58_DELSC
HAD family hydrolase Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
HAD-superfamily hydrolase
SCNpilot_BF_INOC_scaffold_833_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7780..8061)
DNA (282bp) protein (94aa)
trkG; membrane component of K+ transport systems; K03498 trk system potassium uptake protein TrkH Tax=CG_Rhodof_02
trkG; membrane component of K+ transport systems
cation transporter id=12550764 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_833_10
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8058..9251)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002D77A3E
trkG; membrane component of K+ transport systems
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_833_11
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9263..10651)
DNA (1389bp) protein (463aa)
trkA; NAD binding component of K+ transport system; K03499 trk system potassium uptake protein TrkA Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
trkA; NAD binding component of K+ transport system; K03499 trk system potassium uptake protein TrkA id=5080390 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
trkA; NAD binding component of K+ transport system
SCNpilot_BF_INOC_scaffold_833_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10738..11172)
DNA (435bp) protein (145aa)
UPF0225 protein Q5W_1267 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR53_9BURK
UPF0225 protein Q5W_1267 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
hypothetical protein
SCNpilot_BF_INOC_scaffold_833_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11169..12305)
DNA (1137bp) protein (379aa)
acyl-CoA dehydrogenase-like protein; K00257 [EC:1.3.99.-] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
butyryl-CoA dehydrogenase n=1 Tax=Brachymonas chironomi RepID=UPI000361B170
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_BF_INOC_scaffold_833_14
Pseudomonas sp. RS-16, Proteobacteria, Bacteria

Not on your lists

comp(12313..13614)
DNA (1302bp) protein (434aa)
Carboxypeptidase G2; Short=CPDG2;; EC=3.4.17.11;; Folate hydrolase G2; Glutamate carboxypeptidase; Pteroylmonoglutamic acid hydrolase G2; AltName: INN=Glucarpidase;; Flags: Precursor;; TaxID=312 speci
carboxypeptidase n=1 Tax=Variovorax paradoxus RepID=UPI00037AD3EA
putative carboxypeptidase, M20A family
SCNpilot_BF_INOC_scaffold_833_15
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13698..14783)
DNA (1086bp) protein (362aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q077_ACIAP
SCNpilot_BF_INOC_scaffold_833_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14847..15089)
DNA (243bp) protein (81aa)
4Fe-4S ferredoxin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003788FAB
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit {ECO:0000313|EMBL:GAD21224.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; B
4Fe-4S ferredoxin
SCNpilot_BF_INOC_scaffold_833_17
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15190..15777)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377884
NnrU family protein {ECO:0000313|EMBL:EER57780.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN
hypothetical protein
SCNpilot_BF_INOC_scaffold_833_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15883..16836
DNA (954bp) protein (318aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenopha
Arginase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQJ5_9BURK
arginase
SCNpilot_BF_INOC_scaffold_833_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16933..18177
DNA (1245bp) protein (415aa)
peptidase M20D, amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32] id=5080612 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
peptidase M20D, amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32] Tax=GWE1_Burkholderiales_65_30_curated
amidohydrolase (EC:3.5.1.32)
SCNpilot_BF_INOC_scaffold_833_20
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18194..19303
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000380928C
Uncharacterized protein {ECO:0000313|EMBL:KJA11860.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_833_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19317..20291)
DNA (975bp) protein (325aa)
NTE family protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XH82_DELAC
patatin; K07001 NTE family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
patatin
SCNpilot_BF_INOC_scaffold_833_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20365..20787)
DNA (423bp) protein (141aa)
PAS sensor protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTQ8_ALIDB
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:ADV01644.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrif
SCNpilot_BF_INOC_scaffold_833_23
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20932..21753
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GIY2_PSEST
Catalytic LigB subunit of aromatic ring-opening dioxygenase
Uncharacterized protein {ECO:0000313|EMBL:AJE22493.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
SCNpilot_BF_INOC_scaffold_833_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21767..22759)
DNA (993bp) protein (331aa)
UbiA prenyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ17_ALIDB
ubia prenyltransferase
UbiA prenyltransferase {ECO:0000313|EMBL:ADU98951.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus deni
SCNpilot_BF_INOC_scaffold_833_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22861..23280
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1U0_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22860.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
SCNpilot_BF_INOC_scaffold_833_26
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23305..24447
DNA (1143bp) protein (381aa)
beta-lactamase n=1 Tax=Curvibacter lanceolatus RepID=UPI00037EC9BD
Beta-lactamase domain protein {ECO:0000313|EMBL:EER61678.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delaf
Zn-dependent hydrolase, including glyoxylase
SCNpilot_BF_INOC_scaffold_833_27
unknown

Not on your lists

comp(24480..25136)
DNA (657bp) protein (219aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_833_28
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25267..26748)
DNA (1482bp) protein (494aa)
amidase (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V5AFR0_9PROT
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_833_29
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26860..27342)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI000377C22F
Peptidase M23B {ECO:0000313|EMBL:KJA11970.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
peptidoglycan-binding LysM
SCNpilot_BF_INOC_scaffold_833_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27423..28235
DNA (813bp) protein (271aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5X6_9BURK
Displaying items 1-30 of 31 in total

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