ggKbase home page

SCNpilot_BF_INOC_scaffold_858

Search features with annotation key words

Displaying items 61-90 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_858_61
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62532..62906)
DNA (375bp) protein (125aa)
Histidine triad (HIT) protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR6_9BURK
Histidine triad (HIT) protein {ECO:0000313|EMBL:EIK91906.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
histidine triad (HIT) protein
SCNpilot_BF_INOC_scaffold_858_62
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62942..64036)
DNA (1095bp) protein (365aa)
Patatin n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QB82_ACIAP
patatin
Patatin {ECO:0000313|EMBL:ADX44944.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 /
SCNpilot_BF_INOC_scaffold_858_63
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64057..64452)
DNA (396bp) protein (132aa)
Putative transmembrane protein id=1270361 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_858_64
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64449..64838)
DNA (390bp) protein (130aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
phosphoribosyl-ATP pyrophosphatase n=1 Tax=Variovorax paradoxus RepID=UPI00036E9D1D
phosphoribosyL-ATP diphosphatase
SCNpilot_BF_INOC_scaffold_858_65
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64844..65233)
DNA (390bp) protein (130aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8X6_ACIDE
SCNpilot_BF_INOC_scaffold_858_66
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65369..66250)
DNA (882bp) protein (294aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] T
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
purine biosynthesis protein purH n=1 Tax=Acidovorax radicis RepID=UPI0002377414
SCNpilot_BF_INOC_scaffold_858_67
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66963..67211)
DNA (249bp) protein (83aa)
DNA-binding protein Fis n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EF9_POLSJ
DNA-binding protein Fis
DNA-binding protein Fis {ECO:0000313|EMBL:ABE43083.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
SCNpilot_BF_INOC_scaffold_858_68
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67216..68247)
DNA (1032bp) protein (344aa)
tRNA-dihydrouridine synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZI2_RAMTT
dusB; tRNA-dihydrouridine synthase B
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_858_69
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68414..69016
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZI3_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG94540.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_858_70
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69089..69742
DNA (654bp) protein (218aa)
Alkylated DNA repair protein n=37 Tax=Bordetella RepID=F4L9Y0_BORPC
alkB; alkylated DNA repair protein
Alkylated DNA repair protein {ECO:0000313|EMBL:CCN25216.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronc
SCNpilot_BF_INOC_scaffold_858_71
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69765..70622
DNA (858bp) protein (286aa)
DNA-O6-methylguanine--protein-cysteine S-methyltransferase {ECO:0000313|EMBL:ABL72303.1}; EC=2.1.1.63 {ECO:0000313|EMBL:ABL72303.1};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteri
DNA-O6-methylguanine--protein-cysteine S-methyltransferase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9V9_PARDP
methylated-DNA--protein-cysteine methyltransferase
SCNpilot_BF_INOC_scaffold_858_72
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70691..71581)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003796714
LysR family transcriptional regulator {ECO:0000313|EMBL:KJA12383.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_858_73
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71697..73214
DNA (1518bp) protein (506aa)
Methylmalonate-semialdehyde dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRS4_ALIDB
methylmalonate-semialdehyde dehydrogenase rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ADV00288.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycl
SCNpilot_BF_INOC_scaffold_858_74
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73441..74604
DNA (1164bp) protein (388aa)
butyryl-CoA dehydrogenase (EC:1.3.99.2)
Acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. CF316 RepID=J1EHC1_9BURK
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJE51691.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;
SCNpilot_BF_INOC_scaffold_858_75
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74619..75755
DNA (1137bp) protein (379aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
Probable enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CAL92684.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAL92684.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhod
Probable enoyl-CoA hydratase/isomerase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1H9_AZOSB
SCNpilot_BF_INOC_scaffold_858_76
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75809..76717
DNA (909bp) protein (303aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=1444315 species="Bacteria; Proteo
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) PF6_PSEUP">RepID=G7UPF6_PSEUP
3-hydroxyisobutyrate dehydrogenase
SCNpilot_BF_INOC_scaffold_858_77
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76941..77990
DNA (1050bp) protein (350aa)
protease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D9EF4
peptidase u32
Peptidase U32 {ECO:0000313|EMBL:AEB83721.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans
SCNpilot_BF_INOC_scaffold_858_78
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78225..79124
DNA (900bp) protein (300aa)
protease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003692F1A
Protease {ECO:0000313|EMBL:GAD24313.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
peptidase U32
SCNpilot_BF_INOC_scaffold_858_79
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79145..79657
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAS0_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43345.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
SCNpilot_BF_INOC_scaffold_858_80
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79654..80046
DNA (393bp) protein (131aa)
hypothetical protein id=12553484 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:GAD24315.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
dgc domain-containing protein
SCNpilot_BF_INOC_scaffold_858_81
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80039..80623
DNA (585bp) protein (195aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364B76E
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
SCNpilot_BF_INOC_scaffold_858_82
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80679..82163
DNA (1485bp) protein (495aa)
UbiD family decarboxylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TYF9_ALIDB
ubid family decarboxylase
UbiD family decarboxylase {ECO:0000313|EMBL:ADV00857.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus d
SCNpilot_BF_INOC_scaffold_858_83
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82197..83417
DNA (1221bp) protein (407aa)
AcnD-accessory protein PrpF n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAT5_ACIET
acnd-accessory protein prpf
AcnD-accessory protein PrpF {ECO:0000313|EMBL:ACM33536.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus
SCNpilot_BF_INOC_scaffold_858_84
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83555..84532
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X527_COMTE
MFS transporter {ECO:0000313|EMBL:KGH25156.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomona
MFS transporter
SCNpilot_BF_INOC_scaffold_858_85
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84539..85399
DNA (861bp) protein (287aa)
carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Curvibacter lanceolatus RepID=UPI000375ADCE
carboxyvinyl-carboxyphosphonate phosphorylmutase
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:AIB13495.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" s
SCNpilot_BF_INOC_scaffold_858_86
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85613..86035)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WWH0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD46263.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_BF_INOC_scaffold_858_87
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86157..87248
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035F6711
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34732.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
SCNpilot_BF_INOC_scaffold_858_88
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87314..91183)
DNA (3870bp) protein (1290aa)
FAD linked oxidase domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4D1_ACISJ
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABM41106.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
FAD linked oxidase domain-containing protein
SCNpilot_BF_INOC_scaffold_858_89
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91432..92739
DNA (1308bp) protein (436aa)
glycerol-3-phosphate ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000374B67A
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) {ECO:0000313|EMBL:CDS53792.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria
extracellular solute-binding protein
SCNpilot_BF_INOC_scaffold_858_90
unknown

Not on your lists

92759..92848
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying items 61-90 of 110 in total

View Taxonomy