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SCNpilot_BF_INOC_scaffold_858

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_858_1
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(582..1238)
DNA (657bp) protein (219aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemo
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TPL2_ACIAC
SCNpilot_BF_INOC_scaffold_858_2
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1324..1809)
DNA (486bp) protein (162aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polarom
Aspartokinase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129L7_POLSJ
SCNpilot_BF_INOC_scaffold_858_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1871..2851)
DNA (981bp) protein (327aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00054821};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036B2E9C
tRNA(ile)-lysidine synthetase
SCNpilot_BF_INOC_scaffold_858_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3315..5531)
DNA (2217bp) protein (739aa)
GTP pyrophosphokinase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000369A206
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:GAD24860.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
(p)ppGpp synthetase I SpoT/RelA
SCNpilot_BF_INOC_scaffold_858_5
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5528..6454)
DNA (927bp) protein (309aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Polaromonas sp. CF318 RepID=J2U4K2_9BURK
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJL86027.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Pol
hypothetical protein
SCNpilot_BF_INOC_scaffold_858_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6623..7366)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6E1_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59942.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
hypothetical protein
SCNpilot_BF_INOC_scaffold_858_7
unknown

Not on your lists

comp(7438..7764)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_858_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7929..8660
DNA (732bp) protein (244aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Variovorax RepID=E6UV13_VARPE
winged helix family two component transcriptional regulator
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_858_9
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8666..10174
DNA (1509bp) protein (503aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
Histidine kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6E3_ACIDE
ATP-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_858_10
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10249..10758)
DNA (510bp) protein (170aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Acidovorax avenae RepID=UPI0003170F39
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
SCNpilot_BF_INOC_scaffold_858_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10755..11456)
DNA (702bp) protein (234aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=1266330 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_858_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11572..13260)
DNA (1689bp) protein (563aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYP7_VARPS
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ACS19006.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Va
SCNpilot_BF_INOC_scaffold_858_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14032..17514
DNA (3483bp) protein (1161aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=232721 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAK7_ACISJ
transcription-repair coupling factor
SCNpilot_BF_INOC_scaffold_858_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17529..18158
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023754F7
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_858_15
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18224..18964
DNA (741bp) protein (247aa)
phosphoserine phosphatase (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=GWA2_Curvibacter_64_110_curated
phosphoserine phosphatase n=1 Tax=Variovorax paradoxus RepID=UPI00036414FF
serB; putative phosphoserine phosphatase SerB
SCNpilot_BF_INOC_scaffold_858_16
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19052..20107
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWM1_LEPCP
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACB35022.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodni
SCNpilot_BF_INOC_scaffold_858_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20207..21295)
DNA (1089bp) protein (363aa)
tryptophan synthase subunit beta (EC:4.2.1.20); K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Tryptophan synthase beta chain n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CRW7_9ALTE
predicted alternative tryptophan synthase beta-subunit
SCNpilot_BF_INOC_scaffold_858_18
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21464..22198
DNA (735bp) protein (245aa)
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen n=1 Tax=Thauera phenylacetica B4P RepID=N6ZSS2_9RHOO
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_858_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22260..23711)
DNA (1452bp) protein (484aa)
exodeoxyribonuclease I (EC:3.1.11.1)
Exodeoxyribonuclease I n=2 Tax=Alicycliphilus denitrificans RepID=E8TZY7_ALIDB
ExodeoxyribonucleaseIprotein {ECO:0000313|EMBL:GAO23518.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_BF_INOC_scaffold_858_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23800..24756
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI00037126C6
Uncharacterized protein {ECO:0000313|EMBL:GAO44708.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
NAD dependent epimerase/dehydratase family protein
SCNpilot_BF_INOC_scaffold_858_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24818..25387)
DNA (570bp) protein (190aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F209C3
ATP-dependent Clp protease, ATP-binding subunit clpA
ATP-dependent Clp protease, ATP-binding subunit clpA {ECO:0000313|EMBL:ADU37449.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" s
SCNpilot_BF_INOC_scaffold_858_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25369..27087)
DNA (1719bp) protein (573aa)
ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T197_ACIDE
ATP-dependent Clp protease, ATP-binding subunit clpA {ECO:0000313|EMBL:EER61744.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
ATP-dependent Clp protease ATP-binding protein ClpA
SCNpilot_BF_INOC_scaffold_858_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27181..27411)
DNA (231bp) protein (77aa)
ATP-dependent Clp protease ClpS n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00036D3D83
clpS; ATP-dependent Clp protease adaptor protein ClpS
clpS; ATP-dependent Clp protease adaptor protein ClpS Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_BF_INOC_scaffold_858_24
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27683..27955
DNA (273bp) protein (91aa)
Candidate cold shock-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZB0_RAMTT
cspD; cold shock
Candidate cold shock-like protein {ECO:0000313|EMBL:AEG93280.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter
SCNpilot_BF_INOC_scaffold_858_25
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28035..29288)
DNA (1254bp) protein (418aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
icdA; isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] id=5081716 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
icd; isocitrate dehydrogenase
SCNpilot_BF_INOC_scaffold_858_26
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29496..29975
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RPI4_COMTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHN65729.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas tes
hypothetical protein
SCNpilot_BF_INOC_scaffold_858_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30145..32382)
DNA (2238bp) protein (746aa)
isocitrate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A856C
Isocitrate dehydrogenase {ECO:0000313|EMBL:GAD21965.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7
SCNpilot_BF_INOC_scaffold_858_28
Acinetobacter sp. NIPH 2036, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32550..33428)
DNA (879bp) protein (293aa)
DASS family divalent anion:Na+ symporter n=1 Tax=Acinetobacter sp. NIPH 2036 RepID=S3TD20_9GAMM
DASS family divalent anion:Na+ symporter {ECO:0000313|EMBL:EPG37589.1}; TaxID=1217696 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="A
anion transporter
SCNpilot_BF_INOC_scaffold_858_29
Aggregatibacter actinomycetemcomitans, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33626..34036
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Aggregatibacter actinomycetemcomitans serotype d str. I63B RepID=G4A064_AGGAC
Uncharacterized protein; TaxID=907487 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter actinomycetemcomitans serotype d str. I63B.;"
SCNpilot_BF_INOC_scaffold_858_30
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34250..34831)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
sodB2; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YFL5_9BURK
Displaying items 1-30 of 110 in total

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