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SCNpilot_BF_INOC_scaffold_858_24

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 27683..27955

Top 3 Functional Annotations

Value Algorithm Source
Candidate cold shock-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZB0_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 85.0
  • Bit_score: 113
  • Evalue 1.60e-22
cspD; cold shock similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 85.0
  • Bit_score: 113
  • Evalue 4.50e-23
Candidate cold shock-like protein {ECO:0000313|EMBL:AEG93280.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 85.0
  • Bit_score: 113
  • Evalue 2.20e-22

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGCCCGAAGGAAAAGTCAAGTGGTTCAACGACCTGAAGGGGTTCGGCTTCATCGAGCCGGACGGCGGCGGTCCGGACGTGTTCGCGCACTTTTCGGCCATCGACATGGACGGATTCAAGACGCTGAAGGAAGGTGCCCGCGTCAGCTACGAGGTCAACCAGGGTCCCAAGGGCCTGCTGGCGACGCGGATTCGCGCTGATCCGCTGGGCGCCCTGACGGCGCCACTGCCGGGGTCGTCGATCGCGGCCGACCCGACGGCGCTGCCCCACTGA
PROTEIN sequence
Length: 91
MPEGKVKWFNDLKGFGFIEPDGGGPDVFAHFSAIDMDGFKTLKEGARVSYEVNQGPKGLLATRIRADPLGALTAPLPGSSIAADPTALPH*