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SCNpilot_BF_INOC_scaffold_951

Search features with annotation key words

Displaying items 31-60 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_951_31
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30386..31525)
DNA (1140bp) protein (380aa)
Outer membrane protein assembly factor BamB n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX44_RAMTT
hypothetical protein
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; R
SCNpilot_BF_INOC_scaffold_951_32
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31522..32202)
DNA (681bp) protein (227aa)
Conserved hypothetical transmembrane protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AC0_POLSJ
hypothetical protein
Conserved hypothetical transmembrane protein {ECO:0000313|EMBL:ABE44522.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Pola
SCNpilot_BF_INOC_scaffold_951_33
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(32220..33527)
DNA (1308bp) protein (436aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNF5_POLNA
SCNpilot_BF_INOC_scaffold_951_34
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33602..34870)
DNA (1269bp) protein (423aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX41_RAMTT
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
SCNpilot_BF_INOC_scaffold_951_35
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34873..35751)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP58_9BURK
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_951_36
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35744..36574)
DNA (831bp) protein (277aa)
Tetratricopeptide TPR_2 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AB6_POLSJ
hypothetical protein
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:ABE44526.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
SCNpilot_BF_INOC_scaffold_951_37
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36571..37737)
DNA (1167bp) protein (389aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX38_RAMTT
hypothetical protein
SCNpilot_BF_INOC_scaffold_951_38
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37765..38190)
DNA (426bp) protein (142aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EJV7_9BURK
SCNpilot_BF_INOC_scaffold_951_39
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38297..39691)
DNA (1395bp) protein (465aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Pseudouridine synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX36_RAMTT
hypothetical protein
SCNpilot_BF_INOC_scaffold_951_40
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39681..40415)
DNA (735bp) protein (245aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2X7_ACIAP
chromosome segregation and condensation protein ScpB
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
SCNpilot_BF_INOC_scaffold_951_41
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40526..41605)
DNA (1080bp) protein (360aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Pseudouridine synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX34_RAMTT
rluD; uracil hydrolyase rbh
SCNpilot_BF_INOC_scaffold_951_42
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41608..42411
DNA (804bp) protein (268aa)
Outer membrane protein assembly factor BamD n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXF8_VARPS
outer membrane assembly lipoprotein YfiO
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; V
SCNpilot_BF_INOC_scaffold_951_43
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42472..44556)
DNA (2085bp) protein (695aa)
Candidate ATP-dependent DNA helicase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX33_RAMTT
dinG; ATP-dependent DNA helicase
Candidate ATP-dependent DNA helicase {ECO:0000313|EMBL:AEG92977.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibac
SCNpilot_BF_INOC_scaffold_951_44
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44543..44797)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX32_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92976.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_951_45
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44870..45670
DNA (801bp) protein (267aa)
Serine/threonine protein phosphatase n=1 Tax=Polaromonas sp. CF318 RepID=J3D0D3_9BURK
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EJL81946.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polarom
hypothetical protein
SCNpilot_BF_INOC_scaffold_951_46
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45696..46106)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BWB3_DELAS
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_951_47
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46103..47203)
DNA (1101bp) protein (367aa)
AFG1-family ATPase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS69_ACIAC
AFG1 family ATPase
AFG1-family ATPase {ECO:0000313|EMBL:ABM33807.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain
SCNpilot_BF_INOC_scaffold_951_48
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47277..48707)
DNA (1431bp) protein (477aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003757BA1
SCNpilot_BF_INOC_scaffold_951_49
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48779..49051)
DNA (273bp) protein (91aa)
dihydrolipoamide succinyltransferase (EC:2.3.1.61)
2-oxoglutarate dehydrogenase E2 component n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VND9_POLNA
Dihydrolipoamide succinyltransferase {ECO:0000313|EMBL:KJA09117.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_BF_INOC_scaffold_951_50
unknown

Not on your lists

49174..49512
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_951_51
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49412..49960)
DNA (549bp) protein (183aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
odhB; 2-oxoglutarate dehydrogenase E2 component OdhB (EC:2.3.1.61)
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIH2_9BURK
SCNpilot_BF_INOC_scaffold_951_52
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50064..52940)
DNA (2877bp) protein (959aa)
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:ADV00402.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ADV00402.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC8_ALIDB
SCNpilot_BF_INOC_scaffold_951_53
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53127..55028)
DNA (1902bp) protein (634aa)
Propionate--CoA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W13_RHOFD
Propionate--CoA ligase {ECO:0000313|EMBL:ABD70040.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducen
prpE; propionyl-CoA synthetase
SCNpilot_BF_INOC_scaffold_951_54
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55179..55601)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000368700B
Uncharacterized protein {ECO:0000313|EMBL:EPD39395.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_BF_INOC_scaffold_951_55
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55703..56302)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX24_RAMTT
Isochorismatase {ECO:0000313|EMBL:KJA12341.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_951_56
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56492..57205)
DNA (714bp) protein (238aa)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EER61378.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EER61378.1};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
DNA polymerase III, epsilon subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2B1_ACIDE
dnaQ; DNA polymerase III subunit epsilon
SCNpilot_BF_INOC_scaffold_951_57
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57238..57576)
DNA (339bp) protein (113aa)
(2Fe-2S) ferredoxin n=1 Tax=Comamonas sp. B-9 RepID=UPI0003956BEB
ferredoxin, 2Fe-2S type, ISC system
Ferredoxin, 2Fe-2S type, ISC system {ECO:0000313|EMBL:ADX46677.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_BF_INOC_scaffold_951_58
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57580..59439)
DNA (1860bp) protein (620aa)
Chaperone protein HscA homolog n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWH7_RAMTT
hscA; chaperone protein HscA; K04044 molecular chaperone HscA Tax=GWA2_Curvibacter_64_110_curated
hscA; molecular chaperone DnaK
SCNpilot_BF_INOC_scaffold_951_59
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59479..59997)
DNA (519bp) protein (173aa)
CoA-transferase n=1 Tax=Acidovorax avenae RepID=UPI0003043D2A
co-chaperone Hsc20
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
SCNpilot_BF_INOC_scaffold_951_60
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60207..60530)
DNA (324bp) protein (108aa)
heme biosynthesis protein HemY n=1 Tax=Curvibacter lanceolatus RepID=UPI00037240AC
iron-sulfur cluster assembly protein isca; K13628 iron-sulfur cluster assembly protein Tax=GWA2_Curvibacter_64_110_curated
iron-sulfur cluster assembly protein IscA
Displaying items 31-60 of 70 in total

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