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SCNpilot_BF_INOC_scaffold_951_42

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 41608..42411

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXF8_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 268.0
  • Bit_score: 404
  • Evalue 7.80e-110
outer membrane assembly lipoprotein YfiO similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 268.0
  • Bit_score: 404
  • Evalue 2.20e-110
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; V similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 268.0
  • Bit_score: 404
  • Evalue 1.10e-109

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGCAAGGTGCTCGATTATCGGCCGCTGCCGCCGTCGTGGTCGCGCTCGCGGCGCTGCTGACGGCCTGTTCGTCCAAGCCGGTCGACAAGACCGCCGGCTGGAGCCCCAATCGCATCCATGCGGAAGCCAAGGACGAGCTCAACTCCGGCGCCTACGACAAGGCGATCCCGCTCTACGAAACCCTGGAAGGCCGCGCCGCCGGCACCACGCTGGCGCAGCAGGCGCAGCTGGACAAGGCCTACGCCCTGTTCAAGGACGGTCAGAAGGCCGAGGCGATCGCCACGCTGGACCGCTTCATGCGCCTGCACCCGGCCAGCCCGGCCATCGATTACGCGCTGTTCCTCAAGGGCGTGATCAACTTCAACGACGAGCTGGGCATGTTCTCCTTCCTGTCGCGGCAGGACCTGTCCGAGCGCGACCAGAAGGCGGCCAAGGAAGCCTACGAGTCGTTCAACGAGCTGGTGACGCGCTTTCCCGATTCACGCTATGCGCCCGACGCCCGCGCGCGCATGCGCTTCACGGTCAATGCGCTGGCGCAGTACGAAGTGCACGTGGCGCGCTACTACTTCACGCGCGGCGCCTACGTGGCGGCCATCAACCGGGCGCAGCAGGCGCTGGCCGATTACCGCGACGCGCCATCGCTGGAAGAAGCGCTGTACCTGCTTACCCAGTCCTACGACCGGCTGGGCATGACCGAGCTGCGCGACGACGCGCGGCGCGTGCTGGACAAGAACTACCCCAACAGCGCCTACCTGACGCATGGCCTGCGCGGCGCCGACAAGCCCTGGTGGCAGCTGTGGTGA
PROTEIN sequence
Length: 268
MQGARLSAAAAVVVALAALLTACSSKPVDKTAGWSPNRIHAEAKDELNSGAYDKAIPLYETLEGRAAGTTLAQQAQLDKAYALFKDGQKAEAIATLDRFMRLHPASPAIDYALFLKGVINFNDELGMFSFLSRQDLSERDQKAAKEAYESFNELVTRFPDSRYAPDARARMRFTVNALAQYEVHVARYYFTRGAYVAAINRAQQALADYRDAPSLEEALYLLTQSYDRLGMTELRDDARRVLDKNYPNSAYLTHGLRGADKPWWQLW*