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SCNpilot_BF_INOC_scaffold_965

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_965_1
unknown

Not on your lists

comp(3..92)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_965_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241..1353)
DNA (1113bp) protein (371aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FE9_POLSJ
SCNpilot_BF_INOC_scaffold_965_3
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1377..1937)
DNA (561bp) protein (187aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109, ECO:0000313|EMBL:CDS51291.1};; TaxID=1504672 species="Bac
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VK19_POLNA
SCNpilot_BF_INOC_scaffold_965_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2056..3525)
DNA (1470bp) protein (490aa)
Ig family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Ig family protein id=12549500 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Ig family protein
SCNpilot_BF_INOC_scaffold_965_5
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3568..5730)
DNA (2163bp) protein (721aa)
Candidate Fimbrial assembly protein pilQ, secretin family n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY88_RAMTT
pilQ; fimbrial assembly protein PilQ
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_965_6
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5727..6272)
DNA (546bp) protein (182aa)
Candidate type IV pilus assembly protein PilP, putative lipoprotein of the pilotin family n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY87_RAMTT
pilP; type IV pilus assembly protein PilP lipoprotein of the pilotin family; K02665 type IV pilus assembly protein PilP Tax=GWA2_Curvibacter_64_110_curated
pilP; type IV pilus assembly protein PilP lipoprotein of the pilotin family
SCNpilot_BF_INOC_scaffold_965_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6269..6952)
DNA (684bp) protein (228aa)
Tfp pilus assembly protein PilO n=1 Tax=Variovorax sp. CF313 RepID=J2T420_9BURK
pilO; putative pilus assembly protein PilO
Tfp pilus assembly protein PilO {ECO:0000313|EMBL:EJL72782.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
SCNpilot_BF_INOC_scaffold_965_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6965..7573)
DNA (609bp) protein (203aa)
Tfp pilus assembly protein PilN n=1 Tax=Variovorax sp. CF313 RepID=J3CJK1_9BURK
Tfp pilus assembly protein PilN {ECO:0000313|EMBL:EJL72781.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
fimbrial assembly family protein
SCNpilot_BF_INOC_scaffold_965_9
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7570..8631)
DNA (1062bp) protein (354aa)
Candidate type IV pilus assembly protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY84_RAMTT
pilM; type IV pilus assembly protein
Candidate type IV pilus assembly protein {ECO:0000313|EMBL:AEG91877.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Raml
SCNpilot_BF_INOC_scaffold_965_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8965..11373
DNA (2409bp) protein (803aa)
1A family penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ABM35990.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABM35990.1};; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria;
Penicillin-binding protein, 1A family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VK12_POLNA
SCNpilot_BF_INOC_scaffold_965_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11395..11733)
DNA (339bp) protein (113aa)
frataxin family protein id=12549493 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
frataxin family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cyaY; iron binding protein
SCNpilot_BF_INOC_scaffold_965_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11738..11995
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZQ5_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98602.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_BF_INOC_scaffold_965_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11992..13287
DNA (1296bp) protein (432aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
diaminopimelate decarboxylase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00030450F5
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
SCNpilot_BF_INOC_scaffold_965_14
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13363..13977)
DNA (615bp) protein (205aa)
Sulfoxide reductase heme-binding subunit YedZ n=1 Tax=Acidovorax sp. CF316 RepID=J0KLG8_9BURK
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; Flags: Precursor;; TaxID=1144317
ferric reductase
SCNpilot_BF_INOC_scaffold_965_15
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14122..15117)
DNA (996bp) protein (332aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precur
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY79_RAMTT
hypothetical protein
SCNpilot_BF_INOC_scaffold_965_16
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15173..16513)
DNA (1341bp) protein (447aa)
cytochrome C assembly protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002DAD629
cytochrome c assembly protein Tax=GWA2_Curvibacter_64_110_curated
cytochrome c assembly protein
SCNpilot_BF_INOC_scaffold_965_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16510..18636)
DNA (2127bp) protein (709aa)
ResB family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HNP1_9BURK
ResB family protein
ResB family protein {ECO:0000313|EMBL:AFU44568.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_BF_INOC_scaffold_965_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18822..19439)
DNA (618bp) protein (206aa)
cytochrome C n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000369AFA6
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ADU98595.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
SCNpilot_BF_INOC_scaffold_965_19
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19545..20198
DNA (654bp) protein (218aa)
Probable GTP-binding protein EngB n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G735_ALIDK
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
GTP-binding protein engB
SCNpilot_BF_INOC_scaffold_965_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20345..21259
DNA (915bp) protein (305aa)
Alpha/beta hydrolase fold protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CQF4_VARPS
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACS17780.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax p
SCNpilot_BF_INOC_scaffold_965_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21438..22301)
DNA (864bp) protein (288aa)
lipid A biosynthesis acyltransferase n=1 Tax=Chryseobacterium taeanense RepID=UPI0003044E00
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:EPD43568.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delf
lipid A biosynthesis acyltransferase
SCNpilot_BF_INOC_scaffold_965_22
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22298..23131)
DNA (834bp) protein (278aa)
Acyltransferases-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY73_RAMTT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_965_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23269..24456
DNA (1188bp) protein (396aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
s-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037EC095
SCNpilot_BF_INOC_scaffold_965_24
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24508..25077)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI0003800EE7
Glycoside hydrolase {ECO:0000313|EMBL:KGH27190.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudo
NLP/P60 protein
SCNpilot_BF_INOC_scaffold_965_25
unknown

Not on your lists

comp(25172..25324)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_965_26
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25329..25634)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FVF2_PSYA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ18006.1}; TaxID=259536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter arcti
SCNpilot_BF_INOC_scaffold_965_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25801..26706)
DNA (906bp) protein (302aa)
Pirin domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQX3_ALIDB
Pirin domain-containing protein
Pirin domain protein {ECO:0000313|EMBL:ADV00209.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitr
SCNpilot_BF_INOC_scaffold_965_28
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27055..29370
DNA (2316bp) protein (772aa)
malic enzyme (EC:1.1.1.39)
Phosphate acetyl/butyryl transferase n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S030_9BURK
Phosphate acetyl/butyryl transferase {ECO:0000313|EMBL:EFV94179.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropi
SCNpilot_BF_INOC_scaffold_965_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29680..30264)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWQ8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47368.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_BF_INOC_scaffold_965_30
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30458..33154
DNA (2697bp) protein (899aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q223I3_RHOFD
GCN5-like protein N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABD67769.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" so
Displaying items 1-30 of 42 in total

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