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SCNpilot_BF_INOC_scaffold_581_76

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(76706..78154)

Top 3 Functional Annotations

Value Algorithm Source
FAD-dependent cmnm(5)s(2)U34 oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI00035C8127 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 482.0
  • Bit_score: 498
  • Evalue 9.40e-138
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 483.0
  • Bit_score: 494
  • Evalue 3.80e-137
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 483.0
  • Bit_score: 494
  • Evalue 1.90e-136

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
ATGCCCGACGAGATCGTCCACTGGCGCGCGGACGGCACGCCCACCAGCGCGCGCTTTGGCGACATCTACCGCAGCGCCGGCACCGACGGCCAGGGCGGGCTGGCGCAGGCACGGCTGGTGTTTCTGCGCGGCTGCGGCCTGTGGCCCGACGGCGACGCCCCCGCCGCCTGGGCCGATGCCGCGCGCTGGGCGGTGCTGGAAACCGGCTTCGGCCTGGGCCTGAACTTCCTGGCCACCTGGCGGGCCTGGCGGACCGACCCCCGGCGGCCTGCGCGGCTGTTCTACAGCGCGGTGGAAGCCTGGCCGCCCGCCGCCGCAGACCTGCTGCGCAGCGCCGCCCCCTACCCCGAGTTGCACGCATTGGCCGAGCAGCTGGCGGCCCAGTGGCACGGCCTGGGCCCCGGCGTGCACCGGCTGCGCTTCGACGCCGAGCAGGTGCAGCTGACGCTGTCGATCGGCGACGTGCAAGCCGCGCTGGCCGAGCTGAGTGGCGCGCACGACAGCGTGTTCCTCGACGGCTTCAGCCCCGCCCGCAACCCCGAGATGTGGAGCCTGCACACGCTCAAGGCGGTGGCCCGGCTGACGCGGCACGGCGCCATGGCCGCCAGCTGGTGCACCGCCGCCGAGGTGCGGCGCGATCTGAACACCTGCGGTTTCGAGGTCGAGCGCGTGCCCGGCCTGCCGCCCAAGCGCCACGCGCTGCGTGCCCGTTATGCGCCGCGCTGGGCCATGGCACGCCCCCGCGCCGACGCGCCCGCGCCAGTCGACGTGCCCGGCCGCTGCGCCATCGTCGGCGCCGGGCTGGCCGGTGCCTCGGTGGCCTGGAGCCTGGCGCAGCGCGGCTGGCAGGTCACCGTGCTCGACCGCGCGCCCCAGCCCGCCGCCGGCGCCAGCGGCCTGCCGGCCGGGGTCATCGCGCCCCACGTCTCGCCCGACGACCGGCCGGTGTCGCGCCTGACCCGCGCCGGCGCGCGCGCCACGCTGGCACGCGCGGCGCTGCTGCTGCGCGAGGGAGTGGACTGGGCCGCCAGCGGCGTGCTGGAGCGCCACGCCGCTGGCGAGCGGCGCCTGCCAGCCGAACTCACCGGCTCGGACGCCACGCGCAGCGACAGCCTGGATGCCCAGCAGCCGCTCACGCGCGCGCAGGCCGGCCGCGCCGGGCTGGCGCTGGACGACGTGCAGCGCGCCCTGTGGCACACCCGGGCCGGCTGGGTGCGCCCGCCGGCGCTGGTGCGCGCCATGCTGCAGGCGCCCGGCATCACGTGGCGCGGCGGCGTGGCGGTGGCGCGCGTCGAGCCCACCGCCAGCGGCTGGCAGGTGCACGACACGGCCGGCGCCCGGCTGGCCGAAGCCGAGCTGGTGGTGATTGCCGCCGGTTTCGATTCGCTGGCGCTGGCCGGCGGGCCGCTGCCACTGCACGCCTTGCGCGGTCAGGTGGCGTTCGGCTGA
PROTEIN sequence
Length: 483
MPDEIVHWRADGTPTSARFGDIYRSAGTDGQGGLAQARLVFLRGCGLWPDGDAPAAWADAARWAVLETGFGLGLNFLATWRAWRTDPRRPARLFYSAVEAWPPAAADLLRSAAPYPELHALAEQLAAQWHGLGPGVHRLRFDAEQVQLTLSIGDVQAALAELSGAHDSVFLDGFSPARNPEMWSLHTLKAVARLTRHGAMAASWCTAAEVRRDLNTCGFEVERVPGLPPKRHALRARYAPRWAMARPRADAPAPVDVPGRCAIVGAGLAGASVAWSLAQRGWQVTVLDRAPQPAAGASGLPAGVIAPHVSPDDRPVSRLTRAGARATLARAALLLREGVDWAASGVLERHAAGERRLPAELTGSDATRSDSLDAQQPLTRAQAGRAGLALDDVQRALWHTRAGWVRPPALVRAMLQAPGITWRGGVAVARVEPTASGWQVHDTAGARLAEAELVVIAAGFDSLALAGGPLPLHALRGQVAFG*