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SCNpilot_BF_INOC_scaffold_899_13

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(11791..12414)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 202.0
  • Bit_score: 259
  • Evalue 5.80e-66
3-isopropylmalate dehydratase small subunit n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QGL3_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 202.0
  • Bit_score: 252
  • Evalue 3.90e-64
leuD; 3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 202.0
  • Bit_score: 252
  • Evalue 1.10e-64

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Taxonomy

Bordetella hinzii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGCAGAAGTTTGAGGAAGTCATCGGCGTGGCGCTGCCGCTGGACCGCGCCAACGTGGACACCGACGCCATCATTCCGCAGCGCTGGCTGGTCACGGTCTCGCGCACCGGACTGGGCGCCGGCCTGTTCGGCGTCTGGCGCTATGACGCGCAGGGCGCGCCCCGGCCCGACTTCGTGCTCAACCAGTCGGCCTACCGCGGTGCCCGCATCGTCGTCGCTGGCGCCAACTACGGCTGCGGCTCGTCGCGCGAGCACGCTGTGTGGGCGCACTTGGACCATGGCGTGCGCGCGGTGATCGCGCCCAGCTTCGGGCCGATCTTCGAGGAGAACTGCCTGAACAACGGCCTGCTGCCGGTGACGCTGCCGGCGCTGGTGGTGCAGCGCATCATGCAGCAGCTGCTGGCGCACCCGGGTGCGCGCTGTGGCGTCGACCTGCGCCGCCGCCAGGTGACCGGCCCCGACGGCGAGCGCCACCCCTTTCCCATGGATCCGGGTCGCCGCGAAGCGCTGCTCGAAGGATGGGATGCCATAGCGGTCACCGAACGAGAGAGCGCCGCCATCGCGGCCTTCCAGGCGCGCCAGCTCGGCGCCATGCCCTGGCTGGGTGCGGGCGCTGCGTCGTGA
PROTEIN sequence
Length: 208
MQKFEEVIGVALPLDRANVDTDAIIPQRWLVTVSRTGLGAGLFGVWRYDAQGAPRPDFVLNQSAYRGARIVVAGANYGCGSSREHAVWAHLDHGVRAVIAPSFGPIFEENCLNNGLLPVTLPALVVQRIMQQLLAHPGARCGVDLRRRQVTGPDGERHPFPMDPGRREALLEGWDAIAVTERESAAIAAFQARQLGAMPWLGAGAAS*