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SCNpilot_BF_INOC_scaffold_899

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_899_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84..308
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=D0J1A3_COMT2
hypothetical protein
Ferredoxin {ECO:0000313|EMBL:KGH10240.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas tes
SCNpilot_BF_INOC_scaffold_899_2
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

844..1128
DNA (285bp) protein (95aa)
Candidate energy transducing system n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1U5_RAMTT
tonB; energy transducing system; K03832 periplasmic protein TonB Tax=GWA2_Curvibacter_64_110_curated
tonB; energy transducing system
SCNpilot_BF_INOC_scaffold_899_3
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1136..1849
DNA (714bp) protein (238aa)
Candidate biopolymer transport protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1U6_RAMTT
tolQ; biopolymer transport protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_899_4
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1855..2274
DNA (420bp) protein (140aa)
Outer membrane transport energization protein ExbD n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQE5_POLNA
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:CDS54601.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polar
SCNpilot_BF_INOC_scaffold_899_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2271..2489
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2H7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46555.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_BF_INOC_scaffold_899_6
unknown

Not on your lists

comp(2641..2928)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_899_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3639..4157)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRG2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91802.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
SCNpilot_BF_INOC_scaffold_899_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4338..5429)
DNA (1092bp) protein (364aa)
ATPase involved in chromosome partitioning n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJL5_9BURK
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EHR70370.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI
ATP-binding protein
SCNpilot_BF_INOC_scaffold_899_9
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5496..6698
DNA (1203bp) protein (401aa)
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Acidovorax sp. CF316 RepID=J0K360_9BURK
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:EJE48805.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
patatin
SCNpilot_BF_INOC_scaffold_899_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6735..8816
DNA (2082bp) protein (694aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5Z8_ACIDE
methionyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_899_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9015..10718
DNA (1704bp) protein (568aa)
Permease family protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HII5_ACHXA
permease
Permease family protein 1 {ECO:0000313|EMBL:ADP14270.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xyl
SCNpilot_BF_INOC_scaffold_899_12
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10748..11785)
DNA (1038bp) protein (346aa)
LacI family transcriptional regulator n=36 Tax=Bordetella RepID=F4LHG3_BORPC
LacI family transcriptional regulator
Probable LacI-family transcriptional regulator {ECO:0000313|EMBL:CCJ63423.1}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source=
SCNpilot_BF_INOC_scaffold_899_13
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11791..12414)
DNA (624bp) protein (208aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QGL3_BORBO
leuD; 3-isopropylmalate dehydratase small subunit
SCNpilot_BF_INOC_scaffold_899_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12401..13831)
DNA (1431bp) protein (477aa)
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33) rbh
3-isopropylmalate dehydratase large subunit {ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.- {ECO:0000256|SAAS:SAAS00274346};; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00091399};; TaxID=1208657 species="Bacteria;
3-isopropylmalate dehydratase large subunit n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U2K6_BORBO
SCNpilot_BF_INOC_scaffold_899_15
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13995..15158
DNA (1164bp) protein (388aa)
Enolase C-terminal domain-like protein n=36 Tax=Bordetella RepID=V8U6E1_BORPT
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:KCB44404.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
mandelate racemase rbh
SCNpilot_BF_INOC_scaffold_899_16
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15172..16086
DNA (915bp) protein (305aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
2-dehydropantoate 2-reductase n=34 Tax=Bordetella RepID=F4LHV9_BORPC
ketopantoate reductase
SCNpilot_BF_INOC_scaffold_899_17
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16114..17088
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037CB42C
Uncharacterized protein {ECO:0000313|EMBL:ESJ04002.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HP
hypothetical protein
SCNpilot_BF_INOC_scaffold_899_18
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17139..17660)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWN0_RAMTT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_899_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17763..17984
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0T5_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24756.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_BF_INOC_scaffold_899_20
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18042..18893
DNA (852bp) protein (284aa)
Segregation and condensation protein A-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWN2_RAMTT
segregation and condensation protein A
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Raml
SCNpilot_BF_INOC_scaffold_899_21
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19160..20470)
DNA (1311bp) protein (437aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Dihydroorotase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZG3_RAMTT
pyrC; dihydroorotase
SCNpilot_BF_INOC_scaffold_899_22
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20658..21620)
DNA (963bp) protein (321aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1437444 species="Ba
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=5080217 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
aspartate carbamoyltransferase (EC:2.1.3.2)
SCNpilot_BF_INOC_scaffold_899_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21623..22123)
DNA (501bp) protein (167aa)
uracil phosphoribosyltransferase n=1 Tax=Curvibacter lanceolatus RepID=UPI000381B3F2
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:AFU47619.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS10
SCNpilot_BF_INOC_scaffold_899_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22120..22539)
DNA (420bp) protein (140aa)
Holliday junction resolvase n=1 Tax=Variovorax paradoxus RepID=UPI0003718939
holliday junction resolvase-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Holliday junction resolvase-like protein
SCNpilot_BF_INOC_scaffold_899_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22536..23135)
DNA (600bp) protein (200aa)
UPF0301 protein Varpa_5221 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5C3_VARPE
hypothetical protein
UPF0301 protein Varpa_5221 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para
SCNpilot_BF_INOC_scaffold_899_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23190..29207)
DNA (6018bp) protein (2006aa)
CheA signal transduction histidine kinase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT48_9BURK
CheA signal transduction histidine kinase Tax=GWA2_Burkholderiales_64_37_curated
CheA signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_899_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29285..31546)
DNA (2262bp) protein (754aa)
Candidate twitching motility protein, methyl-accepting chemotaxis protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZH0_RAMTT
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
pilJ; twitching motility protein, methyl-accepting chemotaxis protein
SCNpilot_BF_INOC_scaffold_899_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31568..31846)
DNA (279bp) protein (93aa)
CheW protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL78_VARPS
CheW protein
CheW protein {ECO:0000313|EMBL:ACS21229.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110
SCNpilot_BF_INOC_scaffold_899_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31843..32046)
DNA (204bp) protein (68aa)
CheW protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL78_VARPS
CheW protein
CheW protein {ECO:0000313|EMBL:ACS21229.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110
SCNpilot_BF_INOC_scaffold_899_30
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32053..32418)
DNA (366bp) protein (122aa)
chemotaxis protein CheY n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003492DE8
response regulator CheY
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
Displaying items 1-30 of 95 in total

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