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SCNpilot_BF_INOC_scaffold_1446

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1446_1
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..296
DNA (294bp) protein (98aa)
LL-diaminopimelate aminotransferase n=7 Tax=Clostridium thermocellum RepID=DAPAT_CLOTH
LL-diaminopimelate aminotransferase
LL-diaminopimelate aminotransferase {ECO:0000255|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000255|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000255|HAMAP-Rule:MF_01642};; Short=LL-DAP-amin
SCNpilot_BF_INOC_scaffold_1446_2
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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342..1055
DNA (714bp) protein (238aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7K7N0_9FIRM
SCNpilot_BF_INOC_scaffold_1446_3
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1090..2454
DNA (1365bp) protein (455aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Coprococcus catus GD/7 RepID=D4J4K1_9FIRM
SCNpilot_BF_INOC_scaffold_1446_4
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2568..4034
DNA (1467bp) protein (489aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EBE4
adenylosuccinate lyase
SCNpilot_BF_INOC_scaffold_1446_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4123..5400
DNA (1278bp) protein (426aa)
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LRV2_9FIRM
SCNpilot_BF_INOC_scaffold_1446_6
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5448..7013
DNA (1566bp) protein (522aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PAZ5_9FIRM
SCNpilot_BF_INOC_scaffold_1446_7
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7171..7347
DNA (177bp) protein (59aa)
Ribbon-helix-helix , copG family protein {ECO:0000313|EMBL:KFM93466.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus maceran
SCNpilot_BF_INOC_scaffold_1446_8
unknown

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7509..7817
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1446_9
Vibrio shilonii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8009..8791)
DNA (783bp) protein (261aa)
Aminoglycoside N3-acetyltransferase n=1 Tax=Vibrio shilonii AK1 RepID=A6CUY6_9VIBR
Aminoglycoside N3-acetyltransferase {ECO:0000313|EMBL:EDL55742.1}; TaxID=391591 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio shilonii AK1
aminoglycoside 3-N-acetyltransferase
SCNpilot_BF_INOC_scaffold_1446_10
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9315..9656
DNA (342bp) protein (114aa)
PadR family transcriptional regulator n=1 Tax=Clostridium sp. BL8 RepID=T0MYR6_9CLOT
transcriptional regulator, PadR-like family
PadR family transcriptional regulator {ECO:0000313|EMBL:EQB87734.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.
SCNpilot_BF_INOC_scaffold_1446_11
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9638..10000
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWN9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ18541.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
SCNpilot_BF_INOC_scaffold_1446_12
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10003..10365
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00036523EE
cytoplasmic protein
Cytoplasmic protein {ECO:0000313|EMBL:AIQ18542.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
SCNpilot_BF_INOC_scaffold_1446_13
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10463..11389
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MT30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02878.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
permease
SCNpilot_BF_INOC_scaffold_1446_14
unknown

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11694..13037
DNA (1344bp) protein (448aa)

This feature has no annotations

Displaying 14 items

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