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SCNpilot_BF_INOC_scaffold_1458

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1458_1
unknown

Not on your lists

253..762
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1458_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(778..1791)
DNA (1014bp) protein (338aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=2 Tax=Clostridium RepID=A7VSE8_9CLOT
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:CDC06184.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sourc
SCNpilot_BF_INOC_scaffold_1458_3
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2046..3791
DNA (1746bp) protein (582aa)
ABC transporter permease/ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CGS6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA72039.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" sourc
SCNpilot_BF_INOC_scaffold_1458_4
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3794..5572
DNA (1779bp) protein (593aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Paenibacillus sanguinis RepID=UPI000368CF1B
multidrug ABC transporter ATP-binding protein
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIQ45077.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus
SCNpilot_BF_INOC_scaffold_1458_5
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

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comp(5822..6445)
DNA (624bp) protein (208aa)
Spore coat assembly protein SafA/uncharacterized protein, YkwD family id=1801148 bin=GWD2_Clostridiales_32_59 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
spore coat assembly protein SafA/uncharacterized protein, YkwD family Tax=GWD2_Clostridiales_32_59_curated
Allergen V5/Tpx-1 related-like protein
SCNpilot_BF_INOC_scaffold_1458_6
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6538..7602)
DNA (1065bp) protein (355aa)
pepQ; Xaa-Pro dipeptidase (EC:3.4.11.9)
Putative Xaa-Pro dipeptidase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N296_9FIRM
Putative Xaa-Pro dipeptidase {ECO:0000313|EMBL:CCY91711.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubact
SCNpilot_BF_INOC_scaffold_1458_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7586..8350)
DNA (765bp) protein (255aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
putative Baf family transcriptional acitvator (EC:2.7.1.33)
Type III pantothenate kinase n=2 Tax=Clostridium RepID=A7VVF8_9CLOT
SCNpilot_BF_INOC_scaffold_1458_8
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(8368..8772)
DNA (405bp) protein (135aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZUH2_THEET
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EGD52228.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaero
bleomycin resistance protein
SCNpilot_BF_INOC_scaffold_1458_9
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8907..10433
DNA (1527bp) protein (509aa)
Mg chelatase, subunit ChlI n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8L5_ETHHY
yifB; putative protein YifB
Uncharacterized protein {ECO:0000313|EMBL:CDZ24059.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_1458_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10569..12503
DNA (1935bp) protein (645aa)
Aconitase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R5D6_9CLOT
Aconitase {ECO:0000313|EMBL:CDC38316.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;
aconitate hydratase
SCNpilot_BF_INOC_scaffold_1458_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12547..13713
DNA (1167bp) protein (389aa)
Putative isocitrate dehydrogenase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6U0_9FIRM
Putative isocitrate dehydrogenase {ECO:0000313|EMBL:EDS12915.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihomi
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_1458_12
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13747..14403
DNA (657bp) protein (219aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MHD0_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental sample
Rex DNA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_1458_13
unknown

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comp(14728..15294)
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1458_14
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(15461..15685)
DNA (225bp) protein (75aa)
Putative uncharacterized protein id=3604029 bin=GWF2_Clostridiales_36_10 species=Collinsella tanakaei genus=Collinsella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Putative uncharacterized protein Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_1458_15
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(15698..16204)
DNA (507bp) protein (169aa)
Putative uncharacterized protein id=4182983 bin=GWF2_Clostridiales_38_85 species=Paenibacillus vortex genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1458_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16427..17089
DNA (663bp) protein (221aa)
MgtC/SapB transporter n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UTY7_CLOBO
MgtC/SapB transporter {ECO:0000313|EMBL:EES51173.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E
MgtC/SapB transporter
SCNpilot_BF_INOC_scaffold_1458_17
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17123..17425)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002E01171
Uncharacterized protein {ECO:0000313|EMBL:KJS17427.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1458_18
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17711..18334
DNA (624bp) protein (208aa)
Transcriptional regulator n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D0U0_DESAJ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFM39414.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphil
SCNpilot_BF_INOC_scaffold_1458_19
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18490..18666)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:ADU26822.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (stra
SCNpilot_BF_INOC_scaffold_1458_20
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(18663..19013)
DNA (351bp) protein (117aa)
Transcriptional regulator Spx/MgsR family n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WIR5_9FIRM
Transcriptional regulator Spx/MgsR family {ECO:0000313|EMBL:CDD10998.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" sourc
arsenate reductase-like protein
SCNpilot_BF_INOC_scaffold_1458_21

Not on your lists

comp(19216..19383)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NKI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AHF25449.1}; TaxID=1393462 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1586.;"
SCNpilot_BF_INOC_scaffold_1458_22
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19396..20187)
DNA (792bp) protein (264aa)
Ferrous iron transporter B n=8 Tax=Clostridium clostridioforme RepID=G5I5K1_9CLOT
Ferrous iron transporter B {ECO:0000313|EMBL:CDB63317.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostrid
ferrous iron transport protein B
SCNpilot_BF_INOC_scaffold_1458_23
unknown

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20890..21342
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1458_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21639..21860)
DNA (222bp) protein (74aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RH10_9CLOT
Ferrous iron transporter A {ECO:0000313|EMBL:ENZ32489.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Fe2+ transport system protein A
SCNpilot_BF_INOC_scaffold_1458_25
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(21871..22080)
DNA (210bp) protein (70aa)
FeoA family protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R661_9FIRM
FeoA family protein {ECO:0000313|EMBL:CCZ36043.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Fe2+ transport system protein A
SCNpilot_BF_INOC_scaffold_1458_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22268..22639
DNA (372bp) protein (124aa)
Transcriptional regulator n=3 Tax=Clostridium bolteae RepID=N9YXV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19447.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL
Transcriptional regulator
SCNpilot_BF_INOC_scaffold_1458_27
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23673..24329
DNA (657bp) protein (219aa)
Uncharacterized protein ORF91 n=1 Tax=Paenibacillus sp. P22 RepID=T2M204_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KHF27783.1}; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1458_28
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26727..26987)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P027_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24020.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_1458_29
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28748..28996
DNA (249bp) protein (83aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LJ00_9FIRM
Displaying 29 items

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