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SCNpilot_BF_INOC_scaffold_15340

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_15340_1
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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92..1030
DNA (939bp) protein (313aa)
Auxin Efflux Carrier n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PV97_9CLOT
Auxin Efflux Carrier {ECO:0000313|EMBL:EET86827.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
malate transporter
SCNpilot_BF_INOC_scaffold_15340_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1040..1756
DNA (717bp) protein (239aa)
RNA methyltransferase TrmH family n=2 Tax=Lachnospiraceae RepID=R6GBJ2_9FIRM
SpoU rRNA Methylase family protein {ECO:0000313|EMBL:KIE48303.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinens
tRNA/rRNA methyltransferase SpoU
SCNpilot_BF_INOC_scaffold_15340_3
Plasmodium reichenowi, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

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1892..2263
DNA (372bp) protein (124aa)
Bifunctional endo-1,4-beta-xylanase xylA, putative n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=Q22TN9_TETTS
Uncharacterized protein {ECO:0000313|EMBL:CDO62310.1}; TaxID=5854 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).;" source="Pl
infB; translation initiation factor IF-2
SCNpilot_BF_INOC_scaffold_15340_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2299..2784)
DNA (486bp) protein (162aa)
Flavodoxin domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3DFA4_CLODI
Flavodoxin domain protein {ECO:0000313|EMBL:EQF25111.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
flavodoxin
SCNpilot_BF_INOC_scaffold_15340_5
unknown

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2976..3119
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_15340_6
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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3202..3900
DNA (699bp) protein (233aa)
glycine cleavage system T protein (EC:2.1.2.10) Tax=GWC2_Clostridiales_40_7_curated
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
hypothetical protein n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI00035D0E67
SCNpilot_BF_INOC_scaffold_15340_7
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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3839..4297
DNA (459bp) protein (153aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protei
Aminomethyltransferase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DF31_9FIRM
gcvT; glycine cleavage system aminomethyltransferase T
SCNpilot_BF_INOC_scaffold_15340_8
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4320..4694
DNA (375bp) protein (125aa)
Glycine cleavage system H protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FG43_9CLOT
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium]
gcvH; glycine cleavage system H protein GcvH
SCNpilot_BF_INOC_scaffold_15340_9
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4706..5593
DNA (888bp) protein (296aa)
gcvPA; glycine dehydrogenase [decarboxylating] subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796}
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMU8_CLOSH
SCNpilot_BF_INOC_scaffold_15340_10
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5535..6032
DNA (498bp) protein (166aa)
glycine dehydrogenase alpha subunit (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796}
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMU8_CLOSH
SCNpilot_BF_INOC_scaffold_15340_11
unknown

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6032..6151
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 11 items

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