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SCNpilot_BF_INOC_scaffold_1959

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1959_1
unknown

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3..191
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1959_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(115..2007)
DNA (1893bp) protein (631aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source=
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y9X1_9FIRM
SCNpilot_BF_INOC_scaffold_1959_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2004..2555)
DNA (552bp) protein (184aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EJF38823.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EJF38823.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
hprT; Hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H0U0_9CLOT
SCNpilot_BF_INOC_scaffold_1959_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2545..3858)
DNA (1314bp) protein (438aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8A9_9FIRM
tRNA(Ile)-lysidine synthetase
SCNpilot_BF_INOC_scaffold_1959_5
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3848..5221)
DNA (1374bp) protein (458aa)
dnaC2; Replicative DNA helicase (EC:3.6.4.12)
Replicative DNA helicase n=1 Tax=Clostridium sp. CAG:557 RepID=R6HCJ1_9CLOT
Replicative DNA helicase {ECO:0000313|EMBL:CDB23877.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridiu
SCNpilot_BF_INOC_scaffold_1959_6
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(5291..5731)
DNA (441bp) protein (147aa)
50S ribosomal protein L9 n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BDS9_9FIRM
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
50S ribosomal protein L9
SCNpilot_BF_INOC_scaffold_1959_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5765..7756)
DNA (1992bp) protein (664aa)
DHHA1 domain protein n=2 Tax=Clostridium RepID=R6P0J3_9CLOT
DHHA1 domain protein {ECO:0000313|EMBL:CDC03472.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium le
phosphoesterase RecJ domain-containing protein
SCNpilot_BF_INOC_scaffold_1959_8
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7836..9425)
DNA (1590bp) protein (530aa)
DNA polymerase III subunit gamma and tau n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E573_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CDA92394.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;"
DNA polymerase III subunits gamma and tau
SCNpilot_BF_INOC_scaffold_1959_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9796..9879
DNA (84bp) protein (28aa)
S-adenosyl-L-homocysteine hydrolase, NAD binding-like domain protein {ECO:0000313|EMBL:EJF41981.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Displaying 9 items

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