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SCNpilot_BF_INOC_scaffold_2311

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2311_1
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

3..629
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003705F43
carbohydrate-binding cenc domain protein Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2311_2
Saccharomyces cerevisiae, Saccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

640..2355
DNA (1716bp) protein (572aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HI35_9FIRM
hypothetical protein
Dan4p {ECO:0000313|EMBL:AJR64230.1}; TaxID=1294313 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.;" source="Sa
SCNpilot_BF_INOC_scaffold_2311_3
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2424..2945)
DNA (522bp) protein (174aa)
Nucleoside recognition n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U867_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24297.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2311_4
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2952..3584)
DNA (633bp) protein (211aa)
Uncharacterized membrane protein required for spore maturation in B.subtilis n=1 Tax=Clostridium sp. CAG:413 RepID=R6P373_9CLOT
Uncharacterized membrane protein required for spore maturation in B.subtilis {ECO:0000313|EMBL:CDC12916.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
nucleoside recognition domain-containing protein
SCNpilot_BF_INOC_scaffold_2311_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3802..3981)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VRD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05262.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
SCNpilot_BF_INOC_scaffold_2311_6
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4105..4908)
DNA (804bp) protein (268aa)
Polysaccharide deacetylase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U6U6_ETHHY
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:CDZ25029.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2311_7
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5033..7486)
DNA (2454bp) protein (818aa)
glycosyl transferase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EC26
cellobiose phosphorylase
Cellobiose phosphorylase {ECO:0000313|EMBL:AEV67189.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (st
SCNpilot_BF_INOC_scaffold_2311_8
unknown

Not on your lists

comp(7515..7934)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2311_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8180..9259
DNA (1080bp) protein (360aa)
Trypsin n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9G4_9CLOT
Trypsin {ECO:0000313|EMBL:EEG31874.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
trypsin-like serine protease with C-terminal PDZ domain
SCNpilot_BF_INOC_scaffold_2311_10
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9536..10417
DNA (882bp) protein (294aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=6 Tax=Clostridium thermocellum RepID=E6UQS8_CLOTL
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ABN53163.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" s
SCNpilot_BF_INOC_scaffold_2311_11
unknown

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comp(10929..11342)
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2311_12
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

11672..11995
DNA (324bp) protein (108aa)
Putative bacteriophage repressor protein CI
Putative Xre family DNA-binding protein id=3182559 bin=GWF2_Clostridiales_36_10 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
putative Xre family DNA-binding protein Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2311_13
unknown

Not on your lists

12037..12168
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2311_14
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12265..12942
DNA (678bp) protein (226aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U633_ETHHY
CarD family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADU25712.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenen
SCNpilot_BF_INOC_scaffold_2311_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12939..13253)
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:43 RepID=R7B0D7_9CLOT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:4
SCNpilot_BF_INOC_scaffold_2311_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13460..14122)
DNA (663bp) protein (221aa)
Protein dedA n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZWL8_9PORP
Protein dedA {ECO:0000313|EMBL:EKN15710.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.
dedA; hypothetical protein
SCNpilot_BF_INOC_scaffold_2311_17
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14222..15019)
DNA (798bp) protein (266aa)
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GTK7_CLOLD
SCNpilot_BF_INOC_scaffold_2311_18
unknown

Not on your lists

comp(15146..15814)
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2311_19
unknown

Not on your lists

comp(15863..16024)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 19 items

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