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SCNpilot_BF_INOC_scaffold_2413

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2413_1
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..1245
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Paenibacillus sp. A9 RepID=UPI00036F5A3B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT02295.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
SCNpilot_BF_INOC_scaffold_2413_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1300..1650)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EH45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG29132.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum
SCNpilot_BF_INOC_scaffold_2413_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1758..2246)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=root RepID=R5ME71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89838.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
SCNpilot_BF_INOC_scaffold_2413_4
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2611..3321
DNA (711bp) protein (237aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. CAG:678 RepID=R5L0T3_9CLOT
SCNpilot_BF_INOC_scaffold_2413_5
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3358..4068)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI000373BF82
Membrane protein {ECO:0000313|EMBL:CDX03665.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulf
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_2413_6
unknown

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comp(4343..4564)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2413_7
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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5088..5309
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J7H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS27127.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2413_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5339..6487
DNA (1149bp) protein (383aa)
putative DNA methyltransferase (EC:2.1.1.-)
Putative DNA methyltransferase {ECO:0000313|EMBL:BAH40611.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAH40611.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. 2_1_26 RepID=G5FWH3_9PSED
SCNpilot_BF_INOC_scaffold_2413_9
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6620..7798
DNA (1179bp) protein (393aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Ph
Cytosine-specific methyltransferase n=1 Tax=Pseudomonas sp. 2_1_26 RepID=G5FWH2_9PSED
DNA (cytosine-5-)-methyltransferase
SCNpilot_BF_INOC_scaffold_2413_10
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7782..8693
DNA (912bp) protein (304aa)
mcrB; putative 5-methylcytosine-specific restriction enzyme B (EC:3.1.21.-)
Putative 5-methylcytosine-specific restriction enzyme B {ECO:0000313|EMBL:BAL01386.1}; EC=3.1.21.- {ECO:0000313|EMBL:BAL01386.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales
Putative 5-methylcytosine-specific restriction enzyme B n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L005_OSCVS
SCNpilot_BF_INOC_scaffold_2413_11
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8718..9791
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003609434
Uncharacterized protein {ECO:0000313|EMBL:ERT57130.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
ATPase
SCNpilot_BF_INOC_scaffold_2413_12
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9824..10510
DNA (687bp) protein (229aa)
LlaJI restriction endonuclease n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037039ED
LlaJI restriction endonuclease {ECO:0000313|EMBL:ERT57199.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C1
Restriction endonuclease, type II, LlaJI
Displaying 12 items

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