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SCNpilot_BF_INOC_scaffold_2458

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2458_1
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..673)
DNA (672bp) protein (224aa)
coenzyme F390 synthetase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=720554 species="Bacteria;
Coenzyme F390 synthetase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LT98_CLOCD
SCNpilot_BF_INOC_scaffold_2458_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(901..1491)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PC74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10829.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17
hypothetical protein
SCNpilot_BF_INOC_scaffold_2458_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1557..1832
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VQ17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92770.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
NUDIX hydrolase
SCNpilot_BF_INOC_scaffold_2458_4
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1784..2071
DNA (288bp) protein (96aa)
NUDIX hydrolase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQY8_CLOC7
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADL50276.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 3529
SCNpilot_BF_INOC_scaffold_2458_5
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2171..2608
DNA (438bp) protein (146aa)
heat shock protein Hsp20 n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E304D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24028.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2458_6
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2657..3643)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6B6_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KJS18745.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2458_7
unknown

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comp(3692..3871)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2458_8
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4094..5203)
DNA (1110bp) protein (370aa)
Dockerin type I repeat protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEE9_9CLOT
Dockerin type I repeat protein {ECO:0000313|EMBL:EDO58152.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SCNpilot_BF_INOC_scaffold_2458_9
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5296..6177)
DNA (882bp) protein (294aa)
Chitin binding domain protein n=2 Tax=Paenibacillus RepID=F5LIN4_9BACL
Chitin-binding protein {ECO:0000313|EMBL:KGP81438.1}; TaxID=1395587 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MAEPY2.;"
S-layer protein
SCNpilot_BF_INOC_scaffold_2458_10
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(6458..7129)
DNA (672bp) protein (224aa)
ABC transporter, ATP-binding protein Vexp2 id=4448700 bin=GWF2_Clostridiales_38_85 species=Erysipelotrichaceae bacterium 3_1_53 genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein Tax=GWF2_Clostridiales_38_85_curated
antimicrobial peptide ABC transporter ATPase
SCNpilot_BF_INOC_scaffold_2458_11
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7144..8700)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VMI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEZ85055.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
antimicrobial peptide ABC transporter permease rbh
SCNpilot_BF_INOC_scaffold_2458_12
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8820..10295)
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridi
Signal transduction histidine kinase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FU91_9CLOT
signal transduction histidine kinase rbh
SCNpilot_BF_INOC_scaffold_2458_13
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(10273..10965)
DNA (693bp) protein (231aa)
Two-component response regulator n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TWW4_9FIRM
Two-component response regulator {ECO:0000313|EMBL:CDC72396.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
transcriptional regulator
SCNpilot_BF_INOC_scaffold_2458_14
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11859..12218
DNA (360bp) protein (120aa)
Transcriptional repressor, CopY family n=7 Tax=Clostridium thermocellum RepID=A3DCD5_CLOTH
CopY family transcriptional repressor
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ABN51614.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium t
SCNpilot_BF_INOC_scaffold_2458_15
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13682..14140)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DVU1_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ00624.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 /
hypothetical protein
SCNpilot_BF_INOC_scaffold_2458_16
unknown

Not on your lists

comp(14137..14364)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2458_17
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14538..16235)
DNA (1698bp) protein (566aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:
Putative phosphoglycolate phosphatase, bacterial n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLL2_9FIRM
Phosphoglycolate phosphatase {ECO:0000313|EMBL:KIO44916.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroid
SCNpilot_BF_INOC_scaffold_2458_18
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16316..17221)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI000363A78F
Uncharacterized protein {ECO:0000313|EMBL:CDD04276.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
putative membrane protein
SCNpilot_BF_INOC_scaffold_2458_19
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18104..19960)
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00036E670A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ51315.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
SCNpilot_BF_INOC_scaffold_2458_20
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20155..20724)
DNA (570bp) protein (190aa)
ANTAR domain protein n=6 Tax=Clostridium thermocellum RepID=E6UMB6_CLOTL
Response regulator receiver protein {ECO:0000313|EMBL:KGP76694.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinu
ANTAR domain-containing protein
SCNpilot_BF_INOC_scaffold_2458_21
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21106..21987)
DNA (882bp) protein (294aa)
glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase, type I {ECO:0000313|EMBL:ADZ85917.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ADZ85917.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosi
Glutamine synthetase, type I n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNM8_CELLD
SCNpilot_BF_INOC_scaffold_2458_22
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22760..23134
DNA (375bp) protein (125aa)
glutamine synthetase
glutamine synthetase catalytic region id=4961051 bin=GWC2_Clostridiales_40_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Glutamine synthetase catalytic region {ECO:0000313|EMBL:EHJ01408.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VI
SCNpilot_BF_INOC_scaffold_2458_23
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23211..24809
DNA (1599bp) protein (533aa)
Glutamine synthetase type III domain-containing protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNM1_CELLD
glutamine synthetase type III domain-containing protein
Glutamine synthetase type III domain-containing protein {ECO:0000313|EMBL:ADZ85910.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" sourc
SCNpilot_BF_INOC_scaffold_2458_24
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24957..25943
DNA (987bp) protein (329aa)
Ammonium transporter n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TGI2_9CLOT
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens D
ammonium transporter
Displaying 24 items

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