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SCNpilot_BF_INOC_scaffold_2519

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2519_1
unknown

Not on your lists

1..120
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2519_2
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(246..2150)
DNA (1905bp) protein (635aa)
heat shock protein 90 n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0002D6F758
heat shock protein 90
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:M
SCNpilot_BF_INOC_scaffold_2519_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2251..3015)
DNA (765bp) protein (255aa)
amino acid ABC transporter ATPase component (EC:3.6.3.-)
Amino acid ABC transporter ATPase component {ECO:0000313|EMBL:CCO06088.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO06088.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococc
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2D4_9FIRM
SCNpilot_BF_INOC_scaffold_2519_4
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3028..3678)
DNA (651bp) protein (217aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Thermincola potens (strain JR) RepID=D5XAK3_THEPJ
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADG81302.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Th
SCNpilot_BF_INOC_scaffold_2519_5
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3735..4586)
DNA (852bp) protein (284aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Clostridium sp. BNL1100 RepID=H2JAA9_9CLOT
periplasmic component of amino acid ABC-type transporter/signal transduction system
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:AEY67341.1}; Flags: Precursor;; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridia
SCNpilot_BF_INOC_scaffold_2519_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4653..6257)
DNA (1605bp) protein (535aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Clostridium sp. CAG:352 RepID=R6QNJ1_9CLOT
ABC transporter substrate-binding protein family 5 {ECO:0000313|EMBL:CDC37360.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental sam
ABC-type oligopeptide transport system, periplasmic component
SCNpilot_BF_INOC_scaffold_2519_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6269..6772)
DNA (504bp) protein (168aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia;
ribonucleoside-triphosphate reductase activating protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003826DDE
anaerobic ribonucleoside-triphosphate reductase activating protein
SCNpilot_BF_INOC_scaffold_2519_8
unknown

Not on your lists

7895..8170
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2519_9
unknown

Not on your lists

8233..8712
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2519_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9214..10377)
DNA (1164bp) protein (388aa)
tRNA nucleotidyltransferase (CCA-adding enzyme) n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8F3_9FIRM
tRNA nucleotidyltransferase (CCA-adding enzyme) {ECO:0000313|EMBL:CDE35228.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental sample
PcnB; tRNA nucleotidyltransferase
SCNpilot_BF_INOC_scaffold_2519_11
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10685..11833
DNA (1149bp) protein (383aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
murC; UDP-N-acetylmuramate-L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=3 Tax=root RepID=R5MZN4_9FIRM
SCNpilot_BF_INOC_scaffold_2519_12
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11922..12824)
DNA (903bp) protein (301aa)
YceG family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F0I6_CLOS4
YceG family protein {ECO:0000313|EMBL:ERI98766.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI
hypothetical protein
SCNpilot_BF_INOC_scaffold_2519_13
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12860..13261)
DNA (402bp) protein (134aa)
Secondary thiamine-phosphate synthase enzyme n=1 Tax=Clostridium leptum CAG:27 RepID=R6MYK0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24524.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2519_14
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13697..13978
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6U2V6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC78835.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
SCNpilot_BF_INOC_scaffold_2519_15
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14131..16302
DNA (2172bp) protein (724aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003745B17
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CQR55648.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
SCNpilot_BF_INOC_scaffold_2519_16
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

16316..18394
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BL43_9CLOT
hypothetical protein Tax=CG_Arma_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_2519_17
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18637..19188
DNA (552bp) protein (184aa)
YbaK/prolyl-tRNA synthetase associated region n=2 Tax=Clostridium RepID=U5RSE8_9CLOT
Aminoacyl-tRNA synthetase {ECO:0000313|EMBL:KGK87792.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP5
hypothetical protein
SCNpilot_BF_INOC_scaffold_2519_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19236..19682)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum F RepID=A7GBT1_CLOBL
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22867.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein
SCNpilot_BF_INOC_scaffold_2519_19
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19739..21229)
DNA (1491bp) protein (497aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6YTQ5_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD37275.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridi
hypothetical protein
SCNpilot_BF_INOC_scaffold_2519_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21222..22148)
DNA (927bp) protein (309aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY51_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CDC64920.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="R
SCNpilot_BF_INOC_scaffold_2519_21
unknown

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comp(22150..22659)
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2519_22
Arthrobacter nicotinovorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22846..23697
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Arthrobacter nicotinovorans RepID=Q8GAM7_ARTNI
Uncharacterized protein {ECO:0000313|EMBL:CAD47877.1}; TaxID=29320 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nicotinovorans.;"
VanW family protein
SCNpilot_BF_INOC_scaffold_2519_23
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23711..24157
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R3E8_9CLOT
hypothetical protein
UPF0178 protein Clo1100_3750 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
SCNpilot_BF_INOC_scaffold_2519_24
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25231..25884
DNA (654bp) protein (218aa)
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;
Glycosyl hydrolase family 9/N-terminal ig-like domain of cellulase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FM58_9CLOT
glycosyl hydrolase family protein
SCNpilot_BF_INOC_scaffold_2519_25
Paenibacillus graminis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25955..26704
DNA (750bp) protein (250aa)
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; TaxID=189425 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="
Cellulase n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0IWG4_AMPXN
glycoside hydrolase
SCNpilot_BF_INOC_scaffold_2519_26
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26776..27300
DNA (525bp) protein (175aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1262810 species="Ba
ppa; Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Clostridium sp. CAG:452 RepID=R6YET2_9CLOT
SCNpilot_BF_INOC_scaffold_2519_27
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27400..27837
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:357 RepID=R7CSB9_9FIRM
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister s
rhodanese-like protein
SCNpilot_BF_INOC_scaffold_2519_28
Bacillus sp. NRRL B-14911, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27955..28908
DNA (954bp) protein (318aa)
Esterase n=2 Tax=Bacillus RepID=U5L9L0_9BACI
esterase
Uncharacterized protein {ECO:0000313|EMBL:EAR66342.1}; TaxID=313627 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. NRRL B-14911.;"
SCNpilot_BF_INOC_scaffold_2519_29
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28909..29952)
DNA (1044bp) protein (348aa)
Peptidase M23 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1THY2_9CLOT
metalloendopeptidase-like membrane protein
Peptidase M23 {ECO:0000313|EMBL:EGD45917.1}; Flags: Precursor;; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyr
SCNpilot_BF_INOC_scaffold_2519_30
unknown

Not on your lists

30152..30382
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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