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SCNpilot_BF_INOC_scaffold_2784

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2784_1
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..336
DNA (336bp) protein (112aa)
metA; Homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsucc
Homoserine O-succinyltransferase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DU18_DESRL
SCNpilot_BF_INOC_scaffold_2784_2
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(408..2018)
DNA (1611bp) protein (537aa)
Glycoside hydrolase family 5 n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IFE6_9BACL
Glycoside hydrolase family 5 {ECO:0000313|EMBL:EFM08922.1}; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK
glycoside hydrolase family protein
SCNpilot_BF_INOC_scaffold_2784_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2177..2383
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:EEG29175.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum
SCNpilot_BF_INOC_scaffold_2784_4
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2445..4646)
DNA (2202bp) protein (734aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=110503
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=root RepID=J1H7E0_9CLOT
SCNpilot_BF_INOC_scaffold_2784_5
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4819..5082)
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=1 Tax=Clostridium sp. CAG:557 RepID=R6GSL6_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environ
SSU ribosomal protein S15P
SCNpilot_BF_INOC_scaffold_2784_6
unknown

Not on your lists

comp(5493..5621)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2784_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5626..6447)
DNA (822bp) protein (274aa)
Exonuclease SbcCD C subunit n=1 Tax=Clostridium leptum CAG:27 RepID=R6NBJ8_9CLOT
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:EDO59908.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DS
hypothetical protein
SCNpilot_BF_INOC_scaffold_2784_8
unknown

Not on your lists

comp(6404..6868)
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2784_9
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6924..8615)
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002F0A3C8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24909.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2784_10
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8612..9736)
DNA (1125bp) protein (375aa)
Exonuclease SbcCD, D subunit n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZC9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24910.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2784_11
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9758..10435)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MNF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91224.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_2784_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10561..11889
DNA (1329bp) protein (443aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000366D858
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EJF42143.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M
SCNpilot_BF_INOC_scaffold_2784_13
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11986..13836)
DNA (1851bp) protein (617aa)
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QVP4_9CLOT
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase {ECO:0000313|EMBL:CDC37039.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environment
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_2784_14
unknown

Not on your lists

13967..14152
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2784_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14193..15068
DNA (876bp) protein (292aa)
Ribosome-binding ATPase YchF n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MTT8_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Cl
GTP-binding protein YchF
SCNpilot_BF_INOC_scaffold_2784_16
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15109..15477)
DNA (369bp) protein (123aa)
ABC transport system permease protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LH47_ACEWD
ABC transporter permease
ABC transport system permease protein {ECO:0000313|EMBL:AFA48385.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woo
SCNpilot_BF_INOC_scaffold_2784_17
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(15480..16052)
DNA (573bp) protein (191aa)
ABC transport system permease protein id=3856591 bin=GWF2_Clostridiales_36_10 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
ABC transport system permease Tax=GWF2_Clostridiales_36_10_curated
ABC transporter permease
SCNpilot_BF_INOC_scaffold_2784_18
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(16049..16765)
DNA (717bp) protein (239aa)
ABC transporter related id=3856593 bin=GWF2_Clostridiales_36_10 species=Exiguobacterium sp. genus=Exiguobacterium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=GWF2_Clostridiales_36_10_curated
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_2784_19
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16857..17294
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYW9_9PORP
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_BF_INOC_scaffold_2784_20
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

Not on your lists

17367..18059
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI0003646A29
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15722451}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queensl
hypothetical protein
SCNpilot_BF_INOC_scaffold_2784_21
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18133..18873)
DNA (741bp) protein (247aa)
Nitroreductase family protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QSD1_SPHPG
nitroreductase family protein rbh
Nitroreductase family protein {ECO:0000313|EMBL:AEV30061.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain AT
SCNpilot_BF_INOC_scaffold_2784_22
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18903..19169)
DNA (267bp) protein (89aa)
MarR family transcriptional regulator n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B79097
MarR family transcriptional regulator
Tax=BJP_IG2157_Clostridiales_52_13
SCNpilot_BF_INOC_scaffold_2784_23
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19166..19300)
DNA (135bp) protein (45aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8K1_CLOSW
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADL05730.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (str
SCNpilot_BF_INOC_scaffold_2784_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19338..19811)
DNA (474bp) protein (158aa)
glutathione peroxidase (EC:1.11.1.9)
Glutathione peroxidase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H8H3_9CLOT
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
SCNpilot_BF_INOC_scaffold_2784_25
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19998..21335)
DNA (1338bp) protein (446aa)
Amino acid carrier protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEN8_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:EEG30007.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpento
amino acid carrier protein
SCNpilot_BF_INOC_scaffold_2784_26
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21506..22300)
DNA (795bp) protein (265aa)
phosphohydrolase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2FB80
phosphohydrolase
Predicted phosphohydrolase {ECO:0000313|EMBL:AAM24334.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaer
SCNpilot_BF_INOC_scaffold_2784_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22746..23279
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74623.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM
hypothetical protein
SCNpilot_BF_INOC_scaffold_2784_28
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24131..24385
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MLX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92765.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
Protein of unknown function (DUF1292).
SCNpilot_BF_INOC_scaffold_2784_29
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(24810..26162)
DNA (1353bp) protein (451aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=GWF2_Clostridiales_36_10_curated
excinuclease ABC subunit A id=3085769 bin=GWF2_Clostridiales_36_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
excinuclease ABC subunit A
SCNpilot_BF_INOC_scaffold_2784_30
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26120..27688)
DNA (1569bp) protein (523aa)
Excinuclease ABC, A subunit n=1 Tax=Clostridium termitidis CT1112 RepID=S0FIG4_9CLOT
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis
excinuclease ABC subunit A
Displaying items 1-30 of 33 in total

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