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SCNpilot_BF_INOC_scaffold_3273

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3273_1
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..662
DNA (660bp) protein (220aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
TrpB2 n=2 Tax=Clostridium kluyveri RepID=A5N1S4_CLOK5
tryptophan synthase subunit beta
SCNpilot_BF_INOC_scaffold_3273_2
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(788..1747)
DNA (960bp) protein (320aa)
ldh; L-lactate dehydrogenase (EC:1.1.1.27) rbh
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=29343 species="Bacteria; Firmicutes; Cl
L-lactate dehydrogenase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LP00_9FIRM
SCNpilot_BF_INOC_scaffold_3273_3
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1764..2555)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NEP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB88590.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
Cro/CI family transcriptional regulator
SCNpilot_BF_INOC_scaffold_3273_4
unknown

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2830..3072
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3273_5
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3041..3631)
DNA (591bp) protein (197aa)
Alpha-L-fucosidase n=2 Tax=Paenibacillus RepID=F5LIN7_9BACL
alpha-L-fucosidase
Alpha-L-fucosidase {ECO:0000313|EMBL:AIQ24988.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
SCNpilot_BF_INOC_scaffold_3273_6
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3652..4224)
DNA (573bp) protein (191aa)
alpha-L-fucosidase (EC:3.2.1.51)
alpha-L-fucosidase n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002F844E2
Alpha-L-fucosidase {ECO:0000313|EMBL:EHQ62361.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
SCNpilot_BF_INOC_scaffold_3273_7
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4361..5185
DNA (825bp) protein (275aa)
Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D7E7_PAESJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ45839.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
SCNpilot_BF_INOC_scaffold_3273_8
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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5369..7210
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003737276
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3273_9
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7301..8401
DNA (1101bp) protein (367aa)
Sugar kinase, ribokinase family {ECO:0000313|EMBL:EMS69011.1}; EC=2.7.1.45 {ECO:0000313|EMBL:EMS69011.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Rumi
gck1; Gck (EC:2.7.1.45) rbh
Sugar kinase, ribokinase family n=1 Tax=Clostridium termitidis CT1112 RepID=S0FGV7_9CLOT
SCNpilot_BF_INOC_scaffold_3273_10
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8431..9258
DNA (828bp) protein (276aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LRD4_TEPAE
SCNpilot_BF_INOC_scaffold_3273_11
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9272..9781
DNA (510bp) protein (170aa)
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:ADZ82946.1}; EC=1.1.1.125 {ECO:0000313|EMBL:ADZ82946.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae;
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JGJ1_CELLD
SCNpilot_BF_INOC_scaffold_3273_12
Vibrio furnissii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9738..10004
DNA (267bp) protein (89aa)
2-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Vibrio furnissii RepID=F0LZT1_VIBFN
2-deoxy-D-gluconate 3-dehydrogenase
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:ADT89430.1}; TaxID=903510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio furnissii (s
SCNpilot_BF_INOC_scaffold_3273_13
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10301..15538
DNA (5238bp) protein (1746aa)
Pretoxin HINT domain protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5Y876_9FIRM
Pretoxin HINT domain protein {ECO:0000313|EMBL:CDA12827.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Ana
putative cell wall associated protein
Displaying 13 items

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