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SCNpilot_BF_INOC_scaffold_3363

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3363_1
unknown

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3..83
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3363_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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76..3510
DNA (3435bp) protein (1145aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {E
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH9_9CLOT
recombination helicase AddA
SCNpilot_BF_INOC_scaffold_3363_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3572..4258
DNA (687bp) protein (229aa)
PF06541 family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WX48_9CLOT
PF06541 family protein {ECO:0000313|EMBL:EJF40901.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_3363_4
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4312..5124
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIH9_METAC
Ferredoxin {ECO:0000313|EMBL:AKB38492.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;
hypothetical protein
SCNpilot_BF_INOC_scaffold_3363_5
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5126..6109
DNA (984bp) protein (328aa)
Radical SAM domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8F0_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EEG32261.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpento
hypothetical protein
SCNpilot_BF_INOC_scaffold_3363_6
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6200..7171
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2C6_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE96173.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" sour
SCNpilot_BF_INOC_scaffold_3363_7
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8416..8634
DNA (219bp) protein (73aa)
CopG family transcripitonal regulator n=1 Tax=Paenibacillus fonticola RepID=UPI0003664805
Uncharacterized protein {ECO:0000313|EMBL:EQC88726.1}; TaxID=1234871 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremori
SCNpilot_BF_INOC_scaffold_3363_8
unknown

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8780..9109
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3363_9
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

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9163..9378
DNA (216bp) protein (72aa)
TM2 domain-containing protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PWK2_9BACT
TM2 domain-containing protein {ECO:0000313|EMBL:ERJ12630.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_3363_10
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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9491..10717
DNA (1227bp) protein (409aa)
Radical SAM domain protein id=4182987 bin=GWF2_Clostridiales_38_85 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
putative DNA modification/repair radical SAM protein Tax=GWF2_Clostridiales_38_85_curated
radical SAM protein
SCNpilot_BF_INOC_scaffold_3363_11
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10763..11953
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40950.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
Predicted ATPase (AAA+ superfamily)
SCNpilot_BF_INOC_scaffold_3363_12
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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12138..12830
DNA (693bp) protein (231aa)
Putative ABC transporter ATP-binding protein id=4129565 bin=GWF2_Clostridiales_38_85 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
putative ABC transporter ATP-binding protein Tax=GWF2_Clostridiales_38_85_curated
putative ABC transporter ATP-binding protein
Displaying 12 items

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