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SCNpilot_BF_INOC_scaffold_4221

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4221_1
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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3..539
DNA (537bp) protein (179aa)
molybdate ABC transporter, inner membrane subunit (EC:3.6.3.30)
ABC transporter n=1 Tax=Fischerella muscicola RepID=UPI0002E77A23
ABC transporter {ECO:0000313|EMBL:KIJ73170.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
SCNpilot_BF_INOC_scaffold_4221_2
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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908..1342
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:CCH74115.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
SCNpilot_BF_INOC_scaffold_4221_3
unknown

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1400..1858
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4221_4
unknown

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1906..2391
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4221_5
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2504..3310)
DNA (807bp) protein (269aa)
Pyruvate carboxyltransferase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TH67_9CLOT
Pyruvate carboxyltransferase {ECO:0000313|EMBL:EGD46307.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosol
isopropylmalate/homocitrate/citramalate synthase rbh
SCNpilot_BF_INOC_scaffold_4221_6
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3339..4274)
DNA (936bp) protein (312aa)
Isopropylmalate synthase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R1U0_9CLOT
Isopropylmalate synthase {ECO:0000313|EMBL:EPR12020.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolven
hypothetical protein
SCNpilot_BF_INOC_scaffold_4221_7
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4321..4629)
DNA (309bp) protein (103aa)
Sucraseferredoxin family protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TH65_9CLOT
ferredoxin
Sucraseferredoxin family protein {ECO:0000313|EMBL:EGD46305.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyr
SCNpilot_BF_INOC_scaffold_4221_8
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4743..7097)
DNA (2355bp) protein (785aa)
FeMo cofactor biosynthesis protein NifB n=1 Tax=Clostridium intestinale URNW RepID=U2NIS7_9CLOT
FeMo cofactor biosynthesis protein NifB {ECO:0000313|EMBL:ERK29028.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intest
nitrogenase cofactor biosynthesis protein NifB
SCNpilot_BF_INOC_scaffold_4221_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7297..7611)
DNA (315bp) protein (105aa)
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifE n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TL06_9CLOT
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifE {ECO:0000313|EMBL:EKQ52355.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
nitrogenase MoFe cofactor biosynthesis protein NifE
SCNpilot_BF_INOC_scaffold_4221_10
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7639..8640)
DNA (1002bp) protein (334aa)
nifE3; nitrogenase iron molybdenum cofactor biosynthesis protein NifE3 (EC:1.18.6.1)
Nitrogenase iron molybdenum cofactor biosynthesis protein NifE3 {ECO:0000313|EMBL:AFA47583.1}; EC=1.18.6.1 {ECO:0000313|EMBL:AFA47583.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clost
Nitrogenase iron molybdenum cofactor biosynthesis protein NifE3 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LKJ3_ACEWD
SCNpilot_BF_INOC_scaffold_4221_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8761..10125)
DNA (1365bp) protein (455aa)
nifK; nitrogenase molybdenum-iron protein subunit beta (EC:1.18.6.1)
Nitrogenase molybdenum-iron protein subunit beta n=1 Tax=Clostridium intestinale URNW RepID=U2NK20_9CLOT
Nitrogenase molybdenum-iron protein subunit beta {ECO:0000313|EMBL:ERK29201.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
SCNpilot_BF_INOC_scaffold_4221_12
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10118..11710)
DNA (1593bp) protein (531aa)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022};; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; R
Nitrogenase protein alpha chain n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TH61_9CLOT
nitrogenase component I subunit alpha rbh
SCNpilot_BF_INOC_scaffold_4221_13
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11726..11890)
DNA (165bp) protein (55aa)
Nitrogen regulatory protein PII n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LB34_ACEWD
nifI5; nitrogen regulatory protein PII
Nitrogen regulatory protein PII {ECO:0000313|EMBL:AFA47586.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (s
Displaying 13 items

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