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SCNpilot_BF_INOC_scaffold_4688

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4688_1
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1050)
DNA (1050bp) protein (350aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8T6_ETHHY
GTP-binding protein LepA
SCNpilot_BF_INOC_scaffold_4688_2
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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1181..1516
DNA (336bp) protein (112aa)
Exported protein id=3610189 bin=GWF2_Clostridiales_36_10 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
putative SanA protein Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_4688_3
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1503..1823
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B718_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58970.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
putative SanA protein
SCNpilot_BF_INOC_scaffold_4688_4
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1795..2280
DNA (486bp) protein (162aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z9P8_9FIRM
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EDM50492.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacteriu
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
SCNpilot_BF_INOC_scaffold_4688_5
CG_Arma_01, Armatimonadetes, Bacteria

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2564..2977
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VWI7_POLNA
hypothetical protein Tax=CG_Arma_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_4688_6
CG_Arma_01, Armatimonadetes, Bacteria

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2982..3821
DNA (840bp) protein (280aa)
serine/threonine kinase n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AF629
protein kinase Tax=CG_Arma_01
Protein kinase domain
SCNpilot_BF_INOC_scaffold_4688_7
CG_Arma_01, Armatimonadetes, Bacteria

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3838..4980
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=2 Tax=Burkholderia pseudomallei RepID=C0XXB9_BURPE
hypothetical protein Tax=CG_Arma_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_4688_8
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5138..5305
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBH6_9CLOT
Ribbon-helix-helix , copG family protein {ECO:0000313|EMBL:KFM93515.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus maceran
SCNpilot_BF_INOC_scaffold_4688_9
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5513..5686
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FKT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS69133.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT
hypothetical protein
SCNpilot_BF_INOC_scaffold_4688_10
unknown

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6196..6507
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4688_11
unknown

Not on your lists

comp(6881..7384)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4688_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7538..7897)
DNA (360bp) protein (120aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HI35_9FIRM
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:CCY29400.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SCNpilot_BF_INOC_scaffold_4688_13

Not on your lists

7977..8171
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK45067.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 13 items

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