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SCNpilot_BF_INOC_scaffold_5091

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_5091_1
Eubacterium saphenum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..119
DNA (117bp) protein (39aa)
DNA-binding protein HU n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0W3_9FIRM
DNA-binding protein HU {ECO:0000313|EMBL:EEU03603.1}; TaxID=592031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium saphenum ATCC 49989.;"
histone family protein DNA-binding protein
SCNpilot_BF_INOC_scaffold_5091_2
Clostridium sp. CAG:465, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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261..1094
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:465 RepID=R6U998_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC81110.1}; TaxID=1262811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
SCNpilot_BF_INOC_scaffold_5091_3
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1054..1461
DNA (408bp) protein (136aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FG22_9CLOT
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EMS70160.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] t
Fur family ferric uptake regulator
SCNpilot_BF_INOC_scaffold_5091_4
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1474..2181)
DNA (708bp) protein (236aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RQW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98776.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
livF2; branched-chain amino acid ABC transport ATP-binding protein LivF2
SCNpilot_BF_INOC_scaffold_5091_5
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2174..2944)
DNA (771bp) protein (257aa)
ABC transporter n=1 Tax=Clostridium tunisiense RepID=UPI0003112960
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG83501.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain
SCNpilot_BF_INOC_scaffold_5091_6
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2944..4041)
DNA (1098bp) protein (366aa)
Branched-chain amino acid ABC transport system permease protein LivM2 n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6HF45_9FIRM
Branched-chain amino acid ABC transport system permease protein LivM2 {ECO:0000313|EMBL:CDB35515.1}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Ph
livM2; branched-chain amino acid ABC transport system permease protein LivM2
SCNpilot_BF_INOC_scaffold_5091_7
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4038..4931)
DNA (894bp) protein (298aa)
Branched-chain amino acid ABC transport system permease protein LivH2 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCQ3_ACEWD
ABC transporter permease {ECO:0000313|EMBL:KJF25837.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
livH2; branched-chain amino acid ABC transport system permease protein LivH2
SCNpilot_BF_INOC_scaffold_5091_8
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5006..5203)
DNA (198bp) protein (66aa)
Branched-chain amino binding protein LivK3 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCQ2_ACEWD
livK3; branched-chain amino binding protein precursor LivK3
Branched-chain amino binding protein LivK3 {ECO:0000313|EMBL:AFA49039.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacteriu
Displaying 8 items

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