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SCNpilot_BF_INOC_scaffold_5762

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_5762_1
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..490)
DNA (489bp) protein (163aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium leptum CAG:27 RepID=R6N7F0_9CLOT
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:CDZ24548.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[
SCNpilot_BF_INOC_scaffold_5762_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(505..1107)
DNA (603bp) protein (201aa)
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG81_9CLOT
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEG29512.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Rumin
CDP-alcohol phosphatidyltransferase
SCNpilot_BF_INOC_scaffold_5762_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1140..1841)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MYP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90456.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_5762_4
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1921..3174)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:557 RepID=R6GI10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB24015.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
SCNpilot_BF_INOC_scaffold_5762_5
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3191..3925)
DNA (735bp) protein (245aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. CAG:413 RepID=R6NKJ4_9CLOT
SCNpilot_BF_INOC_scaffold_5762_6
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3922..4713)
DNA (792bp) protein (264aa)
Cobalt transport protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6U962_9CLOT
Cobalt transport protein {ECO:0000313|EMBL:CDC82258.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridiu
ABC-type cobalt transport system, permease component CbiQ and related transporters
SCNpilot_BF_INOC_scaffold_5762_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4710..5573)
DNA (864bp) protein (288aa)
ecfA1; Energy-coupling factor transporter ATP-binding protein EcfA 1 (EC:3.6.3.-) rbh
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MNH2_9FIRM
SCNpilot_BF_INOC_scaffold_5762_8
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5576..6421)
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Cobalt ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CZ96_9CLOT
ABC transporter
SCNpilot_BF_INOC_scaffold_5762_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6418..6663)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6NDN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04326.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
Predicted SAM-dependent methyltransferases
Displaying 9 items

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