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SCNpilot_BF_INOC_scaffold_6104

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_6104_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..759)
DNA (759bp) protein (253aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037DFD32
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostri
DNA mismatch repair protein MutL
SCNpilot_BF_INOC_scaffold_6104_2
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(772..1248)
DNA (477bp) protein (159aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium sp. CAG:413 RepID=R6PHH3_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium;
DNA mismatch repair protein MutS
SCNpilot_BF_INOC_scaffold_6104_3
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1253..3148)
DNA (1896bp) protein (632aa)
DNA mismatch repair protein MutS n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2G9_ETHHY
mutS; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostrid
SCNpilot_BF_INOC_scaffold_6104_4
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3316..3720)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MPT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF02665.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
Protein of unknown function (DUF964).
SCNpilot_BF_INOC_scaffold_6104_5
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3764..5263)
DNA (1500bp) protein (500aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EGA2_9FIRM
SCNpilot_BF_INOC_scaffold_6104_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5336..5632)
DNA (297bp) protein (99aa)
Sporulation protein, YlmC/YmxH family n=1 Tax=Clostridium sp. MSTE9 RepID=J0X1P0_9CLOT
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:EJF42521.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE
sporulation protein, YlmC/YmxH family
SCNpilot_BF_INOC_scaffold_6104_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6011..6610
DNA (600bp) protein (200aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU42_9CLOT
SCNpilot_BF_INOC_scaffold_6104_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6624..6983
DNA (360bp) protein (120aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQE1_9CLOT
phenylalanyl-tRNA synthetase subunit alpha
SCNpilot_BF_INOC_scaffold_6104_9
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6996..7352
DNA (357bp) protein (119aa)
pheT; Phenylalanine-tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium sp. CAG:557 RepID=R6GIA4_9CLOT
Phenylalanine--tRNA ligase beta subunit {ECO:0000313|EMBL:CDB24135.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sou
SCNpilot_BF_INOC_scaffold_6104_10
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7349..8977
DNA (1629bp) protein (543aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; Phenylalanine-tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LXU9_9FIRM
SCNpilot_BF_INOC_scaffold_6104_11
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8977..9303
DNA (327bp) protein (109aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; Phenylalanine-tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium sp. CAG:242 RepID=R6D174_9CLOT
SCNpilot_BF_INOC_scaffold_6104_12
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9395..9640
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XBF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12160.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotr
hypothetical protein
SCNpilot_BF_INOC_scaffold_6104_13
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9655..10617
DNA (963bp) protein (321aa)
Aldo/keto reductase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DKC1_9FIRM
NADP-dependent oxidoreductase domain-containing protein
NADP-dependent oxidoreductase domain protein {ECO:0000313|EMBL:AEF95066.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfoto
SCNpilot_BF_INOC_scaffold_6104_14
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10693..10983
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30883.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum
hypothetical protein
SCNpilot_BF_INOC_scaffold_6104_15
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11049..11543)
DNA (495bp) protein (165aa)
Mn-dependent transcriptional regulator n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LTG3_CLOCD
Mn-dependent transcriptional regulator
Tax=BJP_IG2158_Thermincola_46_17
SCNpilot_BF_INOC_scaffold_6104_16
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11669..11911
DNA (243bp) protein (81aa)
FeoA family protein n=7 Tax=Clostridium thermocellum RepID=A3DFA5_CLOTH
hypothetical protein
Tax=BJP_IG2158_Thermincola_46_17
SCNpilot_BF_INOC_scaffold_6104_17
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11927..12778
DNA (852bp) protein (284aa)
Small GTP-binding protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBQ0_9CLOT
Small GTP-binding protein {ECO:0000313|EMBL:EGD48071.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolven
HSR1-like GTP-binding protein
Displaying 17 items

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