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SCNpilot_BF_INOC_scaffold_1176_12

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(10640..11014)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Clostridium termitidis CT1112 RepID=S0FGU5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 120.0
  • Bit_score: 124
  • Evalue 7.30e-26
Putative transcriptional regulator {ECO:0000313|EMBL:EMS70462.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] te similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 120.0
  • Bit_score: 124
  • Evalue 1.00e-25
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 123.0
  • Bit_score: 121
  • Evalue 2.30e-25

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Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 375
TTGAACCTGTTTGCAGATATGAAGCTGAATGATTCGGAACCGGTGTATTTGCAGATCATCCGGTATGTAAGAATAAAAATACACATAAGGCAAATTGTGCACGGGGATGAGCTTCCCTCTCGCCGTGTGCTTGCCGCTACCCTGGGGATCAATCCGAACACAGTGCAAAAGGCATATAAATGGCTGGAGGATGCAGGAATTTTGTCAACCGGCAACAACACCAAAAGCGTTGTAACGGTGAATAAACAAATTGAAGACAGCATCCAAGCGGATTTAACAGAAGGGGCAGCGGCTGATTTTGTTCGTTACGCGAAAGAAATCAATCTTTCCTATAAGGAGACGATTGCCCTCATCACCAAGCTGTGGGACGAATAA
PROTEIN sequence
Length: 125
LNLFADMKLNDSEPVYLQIIRYVRIKIHIRQIVHGDELPSRRVLAATLGINPNTVQKAYKWLEDAGILSTGNNTKSVVTVNKQIEDSIQADLTEGAAADFVRYAKEINLSYKETIALITKLWDE*