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SCNpilot_BF_INOC_scaffold_1176

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1176_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..238
DNA (237bp) protein (79aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Clostridium sp. MSTE9 RepID=J1H738_9CLOT
SCNpilot_BF_INOC_scaffold_1176_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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249..2303
DNA (2055bp) protein (685aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Clostridium sp. MSTE9 RepID=J1H7Z5_9CLOT
K+-transporting ATPase subunit B rbh
SCNpilot_BF_INOC_scaffold_1176_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2315..2875
DNA (561bp) protein (187aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:M
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Clostridium sp. MSTE9 RepID=J1H759_9CLOT
SCNpilot_BF_INOC_scaffold_1176_4
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2903..3211
DNA (309bp) protein (103aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=44251 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" sourc
Sensor protein KdpD n=1 Tax=Clostridium intestinale URNW RepID=U2NH36_9CLOT
histidine kinase
SCNpilot_BF_INOC_scaffold_1176_5
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3269..5611
DNA (2343bp) protein (781aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Sensor protein KdpD n=1 Tax=Clostridium intestinale URNW RepID=U2NH36_9CLOT
histidine kinase
SCNpilot_BF_INOC_scaffold_1176_6
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5601..6299
DNA (699bp) protein (233aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4AE43_DESDJ
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AFM02228.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcace
SCNpilot_BF_INOC_scaffold_1176_7
unknown

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7062..7247
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1176_8
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7416..8138)
DNA (723bp) protein (241aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FPN8_9CLOT
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EMS70438.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" sourc
ABC transporter
SCNpilot_BF_INOC_scaffold_1176_9
unknown

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comp(8149..9525)
DNA (1377bp) protein (459aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1176_10
unknown

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comp(9528..9809)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1176_11
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9822..10601)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CXY9_PAESJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT00553.1}; Flags: Precursor;; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp.
SCNpilot_BF_INOC_scaffold_1176_12
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10640..11014)
DNA (375bp) protein (125aa)
Putative transcriptional regulator n=1 Tax=Clostridium termitidis CT1112 RepID=S0FGU5_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:EMS70462.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] te
GntR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1176_13
unknown

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comp(11193..12038)
DNA (846bp) protein (282aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1176_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12159..13517)
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF1141_2651 n=1 Tax=Clostridium sp. MSTE9 RepID=J0WUX1_9CLOT
UPF0210 protein HMPREF1141_2651 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.
hypothetical protein
SCNpilot_BF_INOC_scaffold_1176_15
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13544..13813)
DNA (270bp) protein (90aa)
UPF0237 protein BN649_01650 n=1 Tax=Clostridium sp. CAG:413 RepID=R6NP17_9CLOT
UPF0237 protein BN649_01650 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clo
ACT domain-containing protein
SCNpilot_BF_INOC_scaffold_1176_16
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13993..14805
DNA (813bp) protein (271aa)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Clostridium sp. CAG:678 RepID=R5KK83_9CLOT
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:CCY67250.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;
HisJ family histidinol phosphate phosphatase
SCNpilot_BF_INOC_scaffold_1176_17
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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14824..15303
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U440_ETHHY
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADU27720.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens h
SCNpilot_BF_INOC_scaffold_1176_18
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

15300..15746
DNA (447bp) protein (149aa)
Aminotransferase class I/II n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XU87_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDD27298.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Aspartate/tyrosine/aromatic aminotransferase
Displaying 18 items

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