ggKbase home page

SCNpilot_BF_INOC_scaffold_11350_1

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 3..548

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, periplasmic component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FGH3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 181.0
  • Bit_score: 171
  • Evalue 9.90e-40
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EMS70137.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 181.0
  • Bit_score: 171
  • Evalue 1.40e-39
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 183.0
  • Bit_score: 129
  • Evalue 7.10e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 546
AAATATGTGAAAGAATTTAATGAAAAATATCCCGATATTGAAGTGGTTATTGATACGCCGAAGGACTATGATCAGGTTATGAAAATTAAAATGGCTTCCATTGATTTACCGGATGTTTGGACGGTATTTCCGGGCGTTTTCTCAGCAGAGCAGCTGACACAGGCTAATTATCCCCTTGATGAGTTTTCCTTTGCGAAAAATATCATGGGAAAAGATTTGTTTAAAGGCACTGATGATAAAACCTATGCTTTATCAGTTGGATATACCTTGGGCGGAGTGGTTGTGTATAATAAAAAACTGTTTAACCAAGCTTCTGTCTCTGTTCCCAAGACACTGGATGCGTTTATTGCAGCCGGAAAAGCCATAAAAAAAGCCGGAAAAGTCGGGTTGGCCAGCGCAGCAAAAGCACAATGGCCGCTAGTCATGTATGACAGATATATCCCTGTTTTTCTGACAGGAAACCCAAATCTTTTAAATGAACAAGCAGATAAGGATGAGCCGTTTACGCCTGACAGTCCATACGCTAAATCGTTATCCATACTGTAA
PROTEIN sequence
Length: 182
KYVKEFNEKYPDIEVVIDTPKDYDQVMKIKMASIDLPDVWTVFPGVFSAEQLTQANYPLDEFSFAKNIMGKDLFKGTDDKTYALSVGYTLGGVVVYNKKLFNQASVSVPKTLDAFIAAGKAIKKAGKVGLASAAKAQWPLVMYDRYIPVFLTGNPNLLNEQADKDEPFTPDSPYAKSLSIL*