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SCNpilot_BF_INOC_scaffold_11350_2

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 570..1106

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, periplasmic component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FGH3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 175.0
  • Bit_score: 134
  • Evalue 1.30e-28
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EMS70137.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 175.0
  • Bit_score: 134
  • Evalue 1.80e-28
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 178.0
  • Bit_score: 101
  • Evalue 3.50e-19

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Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 537
ATGGAGGAAGACCCCTTATCATCGGATTGGGAGCCTTTAAAAAAAGATTTCAGAGCCGGCAATATCGGAATGTATTTAGGGGACAGTACAGTGGTCCCTCAGTTTACGAGCGATATTCTTAAAGAAAGCGACATTGGAATTTTTCCGTTTCCATTTGACAATGATGAAAATGGAAAAAGATATGTAACCCGTTTAATAGACGCAGGGATTGGCATTTCAAAAAATTCCAAGAATTTAGAAAGCGCAAAATTATTCTTCGAGTTCATGATGAACGAAAAATATTCGGATTTTTCCCAAAAATGCGGTCTTATTCCTGCTAAGGACGGTATAGAAGTTAACTATGACTATTATAACGAATTTAAAAAATTTCCTGTAACATTTTTAGACGGCAGACCTAGAACGCAAAAAACCATGGAAATGATTAATAAAAGTCAAATACAGTTTACTGCAAGAGCACAGGAGGTTTTATCGGGAATTTCGATTGAAACTGTTCTCCAAAGTATGAATAAATCATGGAAAAAAGCACACGAAAACTAG
PROTEIN sequence
Length: 179
MEEDPLSSDWEPLKKDFRAGNIGMYLGDSTVVPQFTSDILKESDIGIFPFPFDNDENGKRYVTRLIDAGIGISKNSKNLESAKLFFEFMMNEKYSDFSQKCGLIPAKDGIEVNYDYYNEFKKFPVTFLDGRPRTQKTMEMINKSQIQFTARAQEVLSGISIETVLQSMNKSWKKAHEN*