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SCNpilot_BF_INOC_scaffold_1207_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 3385..3738

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E918_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 113.0
  • Bit_score: 139
  • Evalue 2.10e-30
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG32035.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 113.0
  • Bit_score: 139
  • Evalue 2.90e-30
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 108.0
  • Bit_score: 129
  • Evalue 6.00e-28

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 354
GTGGACTATGAGTATAACCCGAATATTCCGATCTATATTCAGATCATGGATATCATTAAATTAAAAGTACTGTCAGAAGAATGGAAGGAAGGGGATAGAGTGCCGTCAGTCAGAGATTTAAGCATTGAGTTTTCGGTGAACCCAAATACCATGCAGCGGGCGCTTAGCGAGCTGGAGCGGGAAGGACTCGTGTATTCCGAACGAACCGCCGGGCGGTTTATCACAACAGACAAAGGGAAAATCAATGAAACCCGTGAAGCAATGGCACGGCATACCATCGAGAGCTTTTTAAAGCAAATGCAGAAAGTCGGATTTACCACAGAGCAAATCATCACGAAAATCAAGGAAGTTTAA
PROTEIN sequence
Length: 118
VDYEYNPNIPIYIQIMDIIKLKVLSEEWKEGDRVPSVRDLSIEFSVNPNTMQRALSELEREGLVYSERTAGRFITTDKGKINETREAMARHTIESFLKQMQKVGFTTEQIITKIKEV*