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SCNpilot_BF_INOC_scaffold_1207_9

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 6748..7233

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IBU6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 154.0
  • Bit_score: 176
  • Evalue 2.70e-41
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 154.0
  • Bit_score: 176
  • Evalue 3.80e-41
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 157.0
  • Bit_score: 160
  • Evalue 3.30e-37

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Taxonomy

Ruminococcus sp. CAG:177 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 486
TTGGGTAAAAGCAAGGGCGGAAATACCGTCGATAAGGTTTGGAATATTGTGGAGCCGATTGCCCGGGAGCTGGGGCTGATGATCTGGGATATCCGCTATGTCAAAGAAGGAGCATCCTGGTTTCTGCGAATTTTTATCGACAAGGAAGACGCCGTAACGATTGAGGACTGCGAGCGGCTTTCCAAAGCCATCGATCAGCCCTTGGACGATGCCGATCCTGTTTGTGAGAGCTATTATCTGGAGGTTTCCTCCCCCGGACTGGGCAGGGAGCTTTCCCGGTCCGAGCATTTCGAGCTTCTCGAGGGCGAGGAAATCCGAATCAAGCTGATTCGCCCGGTGGATAACGTAAAGGAGCTGACAGGGCTGCTGGCCGGCTACGCCGACGGAATCATCACCATCAATAAGGATGGTCACCTCATCTCGATAAAAAAATCGGATTGTTCTAAAATATCACTGAATGATGATAAATATATTGGAGGGTTTTAG
PROTEIN sequence
Length: 162
LGKSKGGNTVDKVWNIVEPIARELGLMIWDIRYVKEGASWFLRIFIDKEDAVTIEDCERLSKAIDQPLDDADPVCESYYLEVSSPGLGRELSRSEHFELLEGEEIRIKLIRPVDNVKELTGLLAGYADGIITINKDGHLISIKKSDCSKISLNDDKYIGGF*