ggKbase home page

SCNpilot_BF_INOC_scaffold_1330_18

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(18951..19661)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type metal ion transport system, permease component n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0Z3_CLOCD similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 236.0
  • Bit_score: 344
  • Evalue 1.10e-91
ABC-type metal ion transport system permease similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 236.0
  • Bit_score: 351
  • Evalue 2.00e-94
ABC-type metal ion transport system permease {ECO:0000313|EMBL:CDZ23969.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 236.0
  • Bit_score: 351
  • Evalue 9.70e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 711
ATGAGCTTATTAAATACCCCGTTTTGGGAGGTTTTCAAGGCGTCCTTTTCCCCAAAGGTGTGGAAGGATATCTGTCCCGCCACTGCGGATACGCTTTATATGACATTCATTGCTTCCTTTATTACACTGGTGTTCGGCCTTCTTCTGGGCATTGTCATGACGTTGACCGCAAAAGACGGGCTTCGCCCCGTGCGGCCGTTCAACGCCGGCATGGGTTGGCTCATCAACTGCTTACGCTCCTTACCGCAGATGATTATGATTATTCTTATGATCCCGGTGGCGAGAATGGTGTTCGGAAAATCCTACGGGATGAATTCTTGCATTATTGCACTGGCGGCTTCCTGCATTCCGATGTATGCCCGCGTTGTAGAAAGCAGCTTGCTGGAAATCGCAAAAGGAAAGATCGAAGCGGCAAAATCAATGGGGAGCAATCATTTGCAGACCATCGTGTTTGTGCTTCTTCCGGAAACGCTTCCGTCTTTGATCCGGGGCTTCACGGTTGCGGTCATTGCCATTATTTCCATGACTGCGCTGGCAGGAAATTTCGGCGCGGGCGGCATTGGTGACATTGCTGTGCGGTTCGGTTTTCAGCGGTTCCAGCACGAGGTTTTGTTTGCCTGTGTGTATGTTTTGATTATTACGGTGCAGATTATCCAGTTTGCCGGTGACTTTGCATCCAAGCTTATTTTGAAAAAACGGCATCTTGTTTAA
PROTEIN sequence
Length: 237
MSLLNTPFWEVFKASFSPKVWKDICPATADTLYMTFIASFITLVFGLLLGIVMTLTAKDGLRPVRPFNAGMGWLINCLRSLPQMIMIILMIPVARMVFGKSYGMNSCIIALAASCIPMYARVVESSLLEIAKGKIEAAKSMGSNHLQTIVFVLLPETLPSLIRGFTVAVIAIISMTALAGNFGAGGIGDIAVRFGFQRFQHEVLFACVYVLIITVQIIQFAGDFASKLILKKRHLV*