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SCNpilot_BF_INOC_scaffold_1330

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1330_1
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..915
DNA (915bp) protein (305aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U6W4_ETHHY
cell division protein FtsK
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:ADU26931.1}; Flags: Precursor;; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="E
SCNpilot_BF_INOC_scaffold_1330_2
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1159..2730
DNA (1572bp) protein (524aa)
UPF0313 protein BN578_02323 n=1 Tax=Clostridium leptum CAG:27 RepID=R6N7I0_9CLOT
UPF0313 protein
UPF0313 protein CCDG5_0885 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulos
SCNpilot_BF_INOC_scaffold_1330_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2706..3635
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IVP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42017.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
beta-lactamase domain-containing protein
SCNpilot_BF_INOC_scaffold_1330_4
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3632..3844
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HG03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99647.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
SCNpilot_BF_INOC_scaffold_1330_5
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3857..4546
DNA (690bp) protein (230aa)
Zinc finger CDGSH type family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2G1L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJR47413.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1330_6
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4568..5110
DNA (543bp) protein (181aa)
Isochorismatase family protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GK38_9FUSO
Nicotinamidase-like amidase {ECO:0000313|EMBL:EXG85422.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
isochorismatase family protein
SCNpilot_BF_INOC_scaffold_1330_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5285..6220
DNA (936bp) protein (312aa)
NLP/P60 protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I8D4_CLOCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24109.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_1330_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6543..7025)
DNA (483bp) protein (161aa)
Acetyltransferase, GNAT family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUW2_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDN00163.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATC
GNAT family acetyltransferase
SCNpilot_BF_INOC_scaffold_1330_9
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7578..7853
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N7C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02156.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
Predicted membrane protein
SCNpilot_BF_INOC_scaffold_1330_10
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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8904..11246
DNA (2343bp) protein (781aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=GWF2_Clostridiales_36_10_curated
Valine--tRNA ligase id=4632476 bin=GWF2_Clostridiales_36_10 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
valyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_1330_11
Candidatus Arthromitus sp. SFB-rat-Yit, Candidatus Arthromitus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11545..12249
DNA (705bp) protein (235aa)
macrolide ABC transporter ATP-binding protein n=1 Tax=Paenibacillus fonticola RepID=UPI000373B79F
ABC transporter-like protein rbh
ABC transporter related protein {ECO:0000313|EMBL:BAK80876.1}; TaxID=1041504 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Candidatus Arthromitus.;" source="Candidatus Arth
SCNpilot_BF_INOC_scaffold_1330_12
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

12249..15215
DNA (2967bp) protein (989aa)
Efflux ABC transporter, permease protein id=1870406 bin=GWE2_Firmicute_51_13 species=unknown genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWF2_Firmicutes_51_9_curated
putative ABC transporter permease
SCNpilot_BF_INOC_scaffold_1330_13
unknown

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15445..15717
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1330_14
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15721..16401
DNA (681bp) protein (227aa)
Putative regulatory protein VanR n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W7Z2_9FIRM
Putative regulatory protein VanR {ECO:0000313|EMBL:EFF62812.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibac
regulatory protein
SCNpilot_BF_INOC_scaffold_1330_15
unknown

Not on your lists

16398..16940
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1330_16
Clostridium sp. CAG:594, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16937..17656
DNA (720bp) protein (240aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; env
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:594 RepID=R6CSH7_9CLOT
signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_1330_17
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18069..18920)
DNA (852bp) protein (284aa)
Lipoprotein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H1R9_9CLOT
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
SCNpilot_BF_INOC_scaffold_1330_18
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18951..19661)
DNA (711bp) protein (237aa)
ABC-type metal ion transport system, permease component n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0Z3_CLOCD
ABC-type metal ion transport system permease
ABC-type metal ion transport system permease {ECO:0000313|EMBL:CDZ23969.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostri
SCNpilot_BF_INOC_scaffold_1330_19
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19658..20446)
DNA (789bp) protein (263aa)
metN; Methionine import ATP-binding protein MetN (EC:3.6.3.-)
Methionine import ATP-binding protein MetN {ECO:0000313|EMBL:CDZ23968.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDZ23968.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcace
ABC transporter n=1 Tax=Clostridium sporosphaeroides RepID=UPI000368B61A
SCNpilot_BF_INOC_scaffold_1330_20
Abiotrophia defectiva, Abiotrophia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20484..20981)
DNA (498bp) protein (166aa)
toxin-antitoxin system, toxin component, GNAT family n=1 Tax=Abiotrophia defectiva RepID=UPI0001A4171B
Toxin-antitoxin system, toxin component, GNAT family {ECO:0000313|EMBL:ESK65733.1}; TaxID=592010 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Abiotrophia.;" source="Abiotrop
GNAT family acetyltransferase
SCNpilot_BF_INOC_scaffold_1330_21
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21048..21902)
DNA (855bp) protein (285aa)
nifH4; Nitrogenase iron protein 4 (EC:1.18.6.1)
Nitrogenase iron protein {ECO:0000256|HAMAP-Rule:MF_00533}; EC=1.18.6.1 {ECO:0000256|HAMAP-Rule:MF_00533};; Nitrogenase Fe protein {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase component II {ECO:0000
Nitrogenase iron protein n=6 Tax=Clostridium thermocellum RepID=A3DFS0_CLOTH
SCNpilot_BF_INOC_scaffold_1330_22
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21916..22722)
DNA (807bp) protein (269aa)
ABC transporter related protein n=2 Tax=Clostridium thermocellum RepID=A3DFR9_CLOTH
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABN52798.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermoce
SCNpilot_BF_INOC_scaffold_1330_23
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22719..23810)
DNA (1092bp) protein (364aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FU32_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EMS72694.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Rumi
putative nitrate/sulfonate/bicarbonate ABC transporter permease protein
Displaying 23 items

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