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SCNpilot_BF_INOC_scaffold_1528_6

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(9325..11085)

Top 3 Functional Annotations

Value Algorithm Source
rnjA; Ribonuclease J 1 (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 576.0
  • Bit_score: 774
  • Evalue 3.00e-221
Ribonuclease J 1 {ECO:0000313|EMBL:CDZ23820.1}; EC=3.1.-.- {ECO:0000313|EMBL:CDZ23820.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 576.0
  • Bit_score: 774
  • Evalue 1.50e-220
beta-lactamase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37EF4 similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 581.0
  • Bit_score: 754
  • Evalue 6.70e-215

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Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1761
ATGGCACAATTAAATACGAGCCGTGCACCGCGTCAAACGAAAGCGCGTTCCTTCGGTCCTGCCCGGAAAACCGGCGCAGCCCGTGTAGCAGAACCGGAAATTGCTGCGGATAAGCTGAGAATCATCCCTCTGGGCGGTATTGAGGAAATCGGAAAAAACTGCACCGTCTATGAGTTTGGTGATGATTTATTTATTGTTGACTGCGGTCTGTCCTTCCCGGACGATGATATGCCCGGTGTGGATATCGTCATCCCCGATATGACCTATATCGTAAAAAACAAGGACAGAATCAGAGGCATTGTCATTACCCATGGTCATGAGGATCACATCGGCGCGCTGCCTTATTTGCTGAAAGAGGTCAACATTCCCGTCTATGCCACCCGTCTGTCTCTGGGACTGATTGCGGGAAAAATAAAGGAGCACGGGCTCAAGCACATCAAGCTCAAGGAAGTCAGACCGGGCAGCGTGATTGTTTTGGGCTGCTTTAAGGTTGAGCTGATTCATGTCAACCATTCCATTCCCGACGCAGTTTCGCTGGCCATCAAAACACCCATCGGTACTGTCATTCAAACAGGCGACTTCAAAATCGACAGTACACCCATTGACGATAAAATCATTGACCTGGCACGTTTTTCGGAATATGGCAAAAAAGGGGTTCTGGCACTTTTGTCCGACTCCACCAATGCAAATCGCCCGGGCTATACTGTCAGCGAGCGTAAAGTGGGCGAAAGCTTCTCCTCTATCTTTAAGGGAGCAAGCAACAGCCGTATTATCGTGGCTTCCTTCAGCTCCAACATTCATCGTATTCAGCAAATCGTGGATGAAGCCGTCCGATACGGGCGCAAGGTGGCCGTTTCCGGAAGAAGCATGATCAATGTGGTTTCCATCGGTGTGGAGCTGGGATATTTAAAAATCCCCGAGGGCGTTCTCATTGATATCGATATGATTCGCCGCTACACCCCCGAGCAGTTGGTTATCATTACCACCGGCAGCCAGGGAGAACCCCTGTCCGCCCTGCACAGAATGGCACACAGCGACCATCGTAAGGTCAACGTGGGCAAGGGCGATTTGATTATCATTTCCGCAAGCCCCATTCCCGGCAACGAAAAGTCTGTTTCCAAGGTGGTCAATGAGCTATTGAAGCTGGGAGCAGAGGTTATTTATGAAAAGATGTATGACGTTCATGTTTCCGGCCATGCTTGTCAGGAAGAGCTGAAACTGATGATCGGCATCACAAATCCCAAGTTTTTTATACCTGTACATGGCGAGCAGATGCATTTGCGTAAGCATGCCGGCTTGGCAGAATCTATGGGAATCGATAAAAAGAATATTTTAATTACGGAAATCGGCAGAGTGATTGAGCTGACCGAGGATACCATTAAAACAGCGGGTATGGTACAGTCCGGCCGCATTTTGGTGGACGGGTTGGGCGTCGGCGATGTGGGCAGCATCGTACTGCGTGACCGTAAGCATCTTGCCGAGGACGGTATTATTGTGGTGGTTATGACCACAGACGGTTCCACCGGCGAGGTTGTTGCCGGCCCCGATATTGTCTCCCGCGGATTTGTTTATGTAAGAGAAAGCGAAAAGCTGCTCATTGATGCGAAAAAGATCATTATTGACGCACTGGCTACCTGCAGCGAAAACGGGAACCGAGACTGGAACACCATCAAAGGCAAGGTGAGAGACGATCTTTCTAAATTCCTTTATGAAAAAACCAGAAGAAGCCCCATGGTATTGCCCATCATTATGGAAGTTTAG
PROTEIN sequence
Length: 587
MAQLNTSRAPRQTKARSFGPARKTGAARVAEPEIAADKLRIIPLGGIEEIGKNCTVYEFGDDLFIVDCGLSFPDDDMPGVDIVIPDMTYIVKNKDRIRGIVITHGHEDHIGALPYLLKEVNIPVYATRLSLGLIAGKIKEHGLKHIKLKEVRPGSVIVLGCFKVELIHVNHSIPDAVSLAIKTPIGTVIQTGDFKIDSTPIDDKIIDLARFSEYGKKGVLALLSDSTNANRPGYTVSERKVGESFSSIFKGASNSRIIVASFSSNIHRIQQIVDEAVRYGRKVAVSGRSMINVVSIGVELGYLKIPEGVLIDIDMIRRYTPEQLVIITTGSQGEPLSALHRMAHSDHRKVNVGKGDLIIISASPIPGNEKSVSKVVNELLKLGAEVIYEKMYDVHVSGHACQEELKLMIGITNPKFFIPVHGEQMHLRKHAGLAESMGIDKKNILITEIGRVIELTEDTIKTAGMVQSGRILVDGLGVGDVGSIVLRDRKHLAEDGIIVVVMTTDGSTGEVVAGPDIVSRGFVYVRESEKLLIDAKKIIIDALATCSENGNRDWNTIKGKVRDDLSKFLYEKTRRSPMVLPIIMEV*