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SCNpilot_BF_INOC_scaffold_1528

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1528_1
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..3579
DNA (3579bp) protein (1193aa)
Kelch repeat type 1-containing protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D489
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70043.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
SCNpilot_BF_INOC_scaffold_1528_2
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3749..5917)
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GFJ5_9BACL
Parallel beta-helix repeat {ECO:0000313|EMBL:GAF07670.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1528_3
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6057..8090)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GFJ5_9BACL
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIQ58808.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
SCNpilot_BF_INOC_scaffold_1528_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8275..8883)
DNA (609bp) protein (203aa)
Recombination protein RecR n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M3B8_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" s
recombination protein RecR
SCNpilot_BF_INOC_scaffold_1528_5
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8915..9175)
DNA (261bp) protein (87aa)
Nucleoid-associated protein Ethha_0166 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U6M0_ETHHY
hypothetical protein
Nucleoid-associated protein Ethha_0166 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligene
SCNpilot_BF_INOC_scaffold_1528_6
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9325..11085)
DNA (1761bp) protein (587aa)
rnjA; Ribonuclease J 1 (EC:3.1.-.-)
Ribonuclease J 1 {ECO:0000313|EMBL:CDZ23820.1}; EC=3.1.-.- {ECO:0000313|EMBL:CDZ23820.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" s
beta-lactamase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37EF4
SCNpilot_BF_INOC_scaffold_1528_7
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11252..12364)
DNA (1113bp) protein (371aa)
Nucleotidyl transferase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NHG6_9CLOT
Nucleotidyl transferase {ECO:0000313|EMBL:CDC11573.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
nucleotidyltransferase
SCNpilot_BF_INOC_scaffold_1528_8
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12321..13511)
DNA (1191bp) protein (397aa)
Nucleotidyl transferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U4R6_ETHHY
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:CDZ23819.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_1528_9
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13686..14132
DNA (447bp) protein (149aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
RNase HI (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C9E2_9FIRM
SCNpilot_BF_INOC_scaffold_1528_10
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14254..15180
DNA (927bp) protein (309aa)
birA; biotin--acetyl-CoA-carboxylase ligase BirA (EC:6.3.4.15)
Biotin--acetyl-CoA-carboxylase ligase BirA n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEX4_ACEWD
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
SCNpilot_BF_INOC_scaffold_1528_11
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15189..15743
DNA (555bp) protein (185aa)
BioY family protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MIN9_9FIRM
bioY; putative biotin transporter BioY
Tax=BJP_IG2157_Clostridiales_52_13
SCNpilot_BF_INOC_scaffold_1528_12
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15784..16476)
DNA (693bp) protein (231aa)
Spore cortex-lytic enzyme n=2 Tax=Clostridium RepID=A7VSA1_9CLOT
Spore cortex-lytic enzyme {ECO:0000313|EMBL:EDO61931.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 7
spore cortex-lytic protein
SCNpilot_BF_INOC_scaffold_1528_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16659..17279
DNA (621bp) protein (207aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;"
Putative pyridoxal kinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P967_9FIRM
hypothetical protein
Displaying 13 items

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