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SCNpilot_BF_INOC_scaffold_1728_14

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 12002..12691

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=6 Tax=Clostridium thermocellum RepID=A3DFR0_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 218.0
  • Bit_score: 225
  • Evalue 7.30e-56
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 218.0
  • Bit_score: 225
  • Evalue 2.10e-56
ABC transporter related protein {ECO:0000313|EMBL:ABN52789.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermoce similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 218.0
  • Bit_score: 225
  • Evalue 1.00e-55

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 690
ATGGCTATTGCCGTCAAGAACATAACCAAGGAATATAAGCGGGGGAAACGAAGCTTCAAAGCGGTTGATGATGTGAGCCTTGGCTTACACCCGGGCGATTTTATCGTCATCATCGGCAAATCAGGAAGCGGAAAAAGCACCCTGTTAAATATCATTGCCGGGTTGACATATCCCACCGACGGCAGGGTGGAGGCTGATGAAAGCAACATTTTTACGTTGACTGACAAACAAATATCGCGCTATCGTAACCAAACAATCGGTTATATACCACAGGGGCACAGCACACTGGCGGATTTGAACGTGGTGGATAATGTACGCCTTCCCTTTCATCTGAACGGCGAAAAAAGAATCAGTGCCGATAAAGCGGAAGAACTGTTAACCCGGGTCGGCATCCATGCTTTGGCAAAGAATTTTCCCAAGCACCTGTCCGGCGGGGAACTTAAACGCGTTGCCATTGCCCGTGCTCTCATCAACGATCCGGAGGCAATCATTGCCGATGAGCCAACGAGTGATTTAGACAAGCAAACAACTGCGGAGGTGTTGACCCTGCTTCGGTCTGTGGCCGAAGGCGGCAAGGCGGTTTTGATGGTGACCCATGATTTGGACGCGGTAAAGTATGCAACCCGCAGCTTTGTCATGGAATCCGGTGTCTTGACCGAGCAAAAAAAGGAGGCGGTGTTATATGTGTAG
PROTEIN sequence
Length: 230
MAIAVKNITKEYKRGKRSFKAVDDVSLGLHPGDFIVIIGKSGSGKSTLLNIIAGLTYPTDGRVEADESNIFTLTDKQISRYRNQTIGYIPQGHSTLADLNVVDNVRLPFHLNGEKRISADKAEELLTRVGIHALAKNFPKHLSGGELKRVAIARALINDPEAIIADEPTSDLDKQTTAEVLTLLRSVAEGGKAVLMVTHDLDAVKYATRSFVMESGVLTEQKKEAVLYV*