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SCNpilot_BF_INOC_scaffold_1648_17

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 17137..17760

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SGC1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 190.0
  • Bit_score: 185
  • Evalue 5.80e-44
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDC60198.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clo similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 190.0
  • Bit_score: 185
  • Evalue 8.10e-44
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 202.0
  • Bit_score: 163
  • Evalue 5.10e-38

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Taxonomy

Clostridium sp. CAG:448 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 624
ATGAATCAACAATCAAGTCTATCGTGTTTTGGAGAAAAGGGGCTTTTGATGGAGAACCTAAAAAAAACGGTATCTGAGAATATAATTTACTTGCGGACACAAAATAAAATGACCCAGTATGAGCTGGGACAACAGCTGAATTATTCCGATAAGGCTGTATCAAAATGGGAACGGGCAGAGTCCATACCCGATGCATACATACTAAAACGAATGAGCGAGCTGTTCGGTGTTACAGTGGATTATCTGTTGAACGACCATGAGGACAGGGATGCACCTCCCATGGAGTTGATCCACCATAACGGCAGGGTCATTACCAAAATGTCGTTTGTGGGGGTTTGGGGACTCGCCATGCTGGCGTTTACGGTCCTGTGGGCTGTTGGCTATGTGGAATGGTTGGTGTTTGTGTATACCCTCCCGATTTCACTGATTGTACTGCTTGTATTAAACTCCGTTTGGGGGAAACGAAAGCGGAACTTTTATATCCTTTCTGCTTTGCTTTGGAGCGTCATTGCCGCTATCTATGTTACCTTCCTTCATTATAACTGGTGGTTGATTTTTGTGCTGGGCATTCCTTCTGAAATCATCCTTTCCCTTAGCTTTAAGATTAAAAGAAAGACAAAATAG
PROTEIN sequence
Length: 208
MNQQSSLSCFGEKGLLMENLKKTVSENIIYLRTQNKMTQYELGQQLNYSDKAVSKWERAESIPDAYILKRMSELFGVTVDYLLNDHEDRDAPPMELIHHNGRVITKMSFVGVWGLAMLAFTVLWAVGYVEWLVFVYTLPISLIVLLVLNSVWGKRKRNFYILSALLWSVIAAIYVTFLHYNWWLIFVLGIPSEIILSLSFKIKRKTK*