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SCNpilot_BF_INOC_scaffold_1968_17

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 16254..17183

Top 3 Functional Annotations

Value Algorithm Source
S1 RNA binding domain protein n=2 Tax=Clostridium RepID=A7VWH3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 309.0
  • Bit_score: 390
  • Evalue 1.80e-105
S1 RNA binding domain protein {ECO:0000313|EMBL:EDO60120.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum D similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 309.0
  • Bit_score: 391
  • Evalue 1.50e-105
Ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 308.0
  • Bit_score: 385
  • Evalue 1.60e-104

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Taxonomy

[Clostridium] leptum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 930
GTGAAAAGATTTTGGCCGGAAGGCCTTTTAATCGATACCCCGGAGAATAAAATCAGCTTACATTCCCCGCTGTCATTGGCAGATGCCTATGCAAAAAAGTATATTCTGGAGGCAGTCGCCGCCGTTTGTGATACAGACCATAACCTGATTGTTGATTTTGGTTTTATGAAAGGGATTATCCCCAGAGAAGAATGCGCACTGGGGATTGCAGACGGGACCGTGCGGGACATTGCCATTATATCCAGGGTCGGCAAAGAGGTTTGCTTTGTGGTTAACTCGATGGAGCTTGACAAAAACGGAAGGCCCCTTGCGGTTTTGTCCCGGAGAGAAGCGCAACAGCGGTGTCACAACGATTATATCAGCACCCTGCAGCCCGGTGATGTAATCGAGGCCCGTGTGACCCATTTGGAACCCTTCGGTGCTTTTTGCGATATCGGCTGCGGCATTGTTTCTCTTTTGCCCATCGATGCTATTTCTGTTTCCCGAATATCACATCCGTCAGACAGGCTTACTACCGGTGAAGTCATCCGTGTTATTGTCAAATCCATTGAGGACGGGCGTATCACGCTAAGCCACAAAGAGCTCTTGGGAACCTGGGAAGAAAACGCCGAATTGTTTTCACAGGGAGAAACCGTTTCGGGAATTGTCCGTTCCGTGGAAGACTACGGAATTTTTGTAGAGCTGACCCCCAATCTGGCAGGATTGGCCGAACCGAAGGAAGGGGTAAAACCCGGTCAGATTGCAAGTGTGTACATAAAAAGTATTATTCCCGAAAAAATGAAAGTGAAACTAATTATTATTGACGCTTTTCAAAAGGATTATACAAAGGAATCCATTAAATATTTTTATGAAGACGATTATATGGATCACTGGCTATATTCACCCGAGGTATGCGAAAAGAAAATCGAAAGTATTTTCTGTACGGATTAA
PROTEIN sequence
Length: 310
VKRFWPEGLLIDTPENKISLHSPLSLADAYAKKYILEAVAAVCDTDHNLIVDFGFMKGIIPREECALGIADGTVRDIAIISRVGKEVCFVVNSMELDKNGRPLAVLSRREAQQRCHNDYISTLQPGDVIEARVTHLEPFGAFCDIGCGIVSLLPIDAISVSRISHPSDRLTTGEVIRVIVKSIEDGRITLSHKELLGTWEENAELFSQGETVSGIVRSVEDYGIFVELTPNLAGLAEPKEGVKPGQIASVYIKSIIPEKMKVKLIIIDAFQKDYTKESIKYFYEDDYMDHWLYSPEVCEKKIESIFCTD*