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SCNpilot_BF_INOC_scaffold_2050_8

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(5615..6505)

Top 3 Functional Annotations

Value Algorithm Source
yhdF; putative oxidoreductase YhdF (EC:1.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 294.0
  • Bit_score: 431
  • Evalue 1.90e-118
  • rbh
Putative oxidoreductase YhdF {ECO:0000313|EMBL:CDZ24673.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDZ24673.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclos similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 294.0
  • Bit_score: 431
  • Evalue 9.30e-118
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z243_DESAF similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 285.0
  • Bit_score: 360
  • Evalue 1.90e-96

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Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 891
ATGGAGAATAAAAGCACCTATCAAAATCCGACGGAAAAACCCCCCGGAGGCTTTCCGCCACAGCATCAGCATATCCAGCCCGGATCACAGCAGCAGATGAATCCCGTGCCGGTTACCGATTATGCCGGTTATAAAGCAGGCGGCAAGCTTACCGGCCGTGTTGCCGTGATTACAGGTGCAGACAGCGGCATCGGACAAGCGGCGGCTTCCATCTTTGCCAAAGAAGGTGCAGATGTTGTTTTTTGCTATTACAGCGAAAAGGAGGACGCAGATGAAACGGTCAAACTGGTTCAGTCTGCAGGACGGCGCTGTGTGGCCGTCAAATGTGACCTGAAGGAAGAGCGAAGCGCAAAGCAGGTGGTGGACTGCGCCGTGCAAGAGCTTGGGAAAATTGATATTTTGGTCAACAACATTGCGGTACAGTATCCCCAAAACAGTATTCTTGATATTACCGCAGAACAATTGAATACTACCTTTGCCACCAATATCTTCAGTTATTTTTATATGACTAAGGCAGTGCTGCCCTATTTAAAAGAGGGTGCATCGATCATCAATACAACCTCCGTCACCGCTTATAAGGGCAGTCCCACCCTGATTGACTATTCCTCCACCAAAGGAGCCATTGTTGCCTTCACCCGCTCTCTTGCCCTGTCTCTCGCCAAGAATGGCATCCGGGTCAACGCAGTGGCACCGGGACCGGTGTGGACACCCTTGATTATATCCAGCTTTCCCCAAGAGGATGTGGCGAAGTTCGGGCAGGATGTTCCCTTGGGCAGGGCGGCACAGCCCTTTGAAATGGGTCCTACCTATGTTTATCTGGCAAGCGACGATTCCGCCTATGTTACCGGTCAGGTTCTCCATGTGAACGGCGGGACCATTACGGATGCATAA
PROTEIN sequence
Length: 297
MENKSTYQNPTEKPPGGFPPQHQHIQPGSQQQMNPVPVTDYAGYKAGGKLTGRVAVITGADSGIGQAAASIFAKEGADVVFCYYSEKEDADETVKLVQSAGRRCVAVKCDLKEERSAKQVVDCAVQELGKIDILVNNIAVQYPQNSILDITAEQLNTTFATNIFSYFYMTKAVLPYLKEGASIINTTSVTAYKGSPTLIDYSSTKGAIVAFTRSLALSLAKNGIRVNAVAPGPVWTPLIISSFPQEDVAKFGQDVPLGRAAQPFEMGPTYVYLASDDSAYVTGQVLHVNGGTITDA*