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SCNpilot_BF_INOC_scaffold_2050

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2050_1
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55..420)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:567 RepID=R7MAM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE96988.1}; TaxID=1262820 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
SCNpilot_BF_INOC_scaffold_2050_2
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(470..1411)
DNA (942bp) protein (314aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminoco
Galactose-1-phosphate uridylyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2N7_ETHHY
SCNpilot_BF_INOC_scaffold_2050_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1408..2712)
DNA (1305bp) protein (435aa)
galK; Galactokinase (EC:2.7.1.6)
GHMP kinase, N-terminal domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P930_9FIRM
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EDS12056.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus col
SCNpilot_BF_INOC_scaffold_2050_4
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists

2971..3900
DNA (930bp) protein (310aa)
Diacylglycerol kinase catalytic region id=2086181 bin=GWE2_Spirochaete_31_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
hypothetical protein Tax=GWE2_Spirochaetes_31_10_curated
diacylglycerol kinase catalytic region
SCNpilot_BF_INOC_scaffold_2050_5
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists

3920..4678
DNA (759bp) protein (253aa)
Phosphoesterase PA-phosphatase related protein id=2086179 bin=GWE2_Spirochaete_31_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
phosphoesterase PA-phosphatase-like protein Tax=GWE2_Spirochaetes_31_10_curated
phosphoesterase PA-phosphatase-like protein
SCNpilot_BF_INOC_scaffold_2050_6
unknown

Not on your lists

comp(4669..5016)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2050_7
Mucispirillum schaedleri, Mucispirillum, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

5202..5579
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mucispirillum schaedleri ASF457 RepID=V2QGE2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ESJ98279.1}; TaxID=1379858 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Mucispirillum.;" source="Mucispirillum schaedleri ASF457
endoribonuclease L-PSP
SCNpilot_BF_INOC_scaffold_2050_8
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5615..6505)
DNA (891bp) protein (297aa)
yhdF; putative oxidoreductase YhdF (EC:1.-.-.-) rbh
Putative oxidoreductase YhdF {ECO:0000313|EMBL:CDZ24673.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDZ24673.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclos
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z243_DESAF
SCNpilot_BF_INOC_scaffold_2050_9
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6636..7466
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI0003765257
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AFH61384.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilagin
SCNpilot_BF_INOC_scaffold_2050_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7575..8279
DNA (705bp) protein (235aa)
Putative PHP domain-containing protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T3K6_ROSHA
putative PHP domain-containing protein
Putative PHP domain-containing protein {ECO:0000313|EMBL:AEN96820.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (st
SCNpilot_BF_INOC_scaffold_2050_11
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8705..9391
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6IXV1_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EST12248.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevola
hypothetical protein
SCNpilot_BF_INOC_scaffold_2050_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9433..10116)
DNA (684bp) protein (228aa)
Glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:EJF42687.1}; EC=4.1.1.70 {ECO:0000313|EMBL:EJF42687.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
sodium ion-translocating decarboxylase subunit beta (EC:4.1.1.70)
glutaconyl-CoA decarboxylase subunit beta n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E333
SCNpilot_BF_INOC_scaffold_2050_13
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(10079..10513)
DNA (435bp) protein (145aa)
glutaconyl-CoA decarboxylase subunit beta; K01572 oxaloacetate decarboxylase, beta subunit [EC:4.1.1.3] Tax=GWB2_Clostridiales_37_7_curated
glutaconyl-CoA decarboxylase subunit beta n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E333
glutaconate CoA transferase subunit B
SCNpilot_BF_INOC_scaffold_2050_14
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(10525..10908)
DNA (384bp) protein (128aa)
carboxylesterase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E334
biotin/lipoyl attachment domain-containing protein Tax=GWB2_Clostridiales_37_7_curated
biotin/lipoyl attachment domain-containing protein
SCNpilot_BF_INOC_scaffold_2050_15
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(10924..11259)
DNA (336bp) protein (112aa)
sodium pump decarboxylase subunit gamma n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E335
sodium pump decarboxylase subunit gamma Tax=GWB2_Clostridiales_37_7_curated
SCNpilot_BF_INOC_scaffold_2050_16
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(11256..12647)
DNA (1392bp) protein (464aa)
oxaloacetate decarboxylase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E336
hypothetical protein Tax=GWB2_Clostridiales_37_7_curated
pyruvate/oxaloacetate carboxyltransferase rbh
SCNpilot_BF_INOC_scaffold_2050_17
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12854..13072)
DNA (219bp) protein (73aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R4K4_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC40089.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="C
putative membrane protein
SCNpilot_BF_INOC_scaffold_2050_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13144..13683)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UXC0_CLOBA
Membrane protein {ECO:0000313|EMBL:KIL08426.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2050_19
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14020..15477
DNA (1458bp) protein (486aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N9R3_9CLOT
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EJF41312.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
SCNpilot_BF_INOC_scaffold_2050_20
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15447..15881)
DNA (435bp) protein (145aa)
Large-conductance mechanosensitive channel n=1 Tax=Clostridium sp. CAG:167 RepID=R5W2D0_9CLOT
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
large conductance mechanosensitive channel protein
SCNpilot_BF_INOC_scaffold_2050_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15941..16621)
DNA (681bp) protein (227aa)
Channel protein hemolysin III family n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9D2_9CLOT
Channel protein hemolysin III family {ECO:0000313|EMBL:CDD74570.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source
hypothetical protein
SCNpilot_BF_INOC_scaffold_2050_22
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16633..17808)
DNA (1176bp) protein (392aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine/D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36EA6
SCNpilot_BF_INOC_scaffold_2050_23
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17832..19409)
DNA (1578bp) protein (526aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clost
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium sp. CAG:678 RepID=R5L2Z3_9CLOT
Mur ligase middle domain-containing protein
SCNpilot_BF_INOC_scaffold_2050_24
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19406..20179)
DNA (774bp) protein (258aa)
alpha/beta hydrolase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36EA8
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ENH97887.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YI
alpha/beta hydrolase fold protein
SCNpilot_BF_INOC_scaffold_2050_25
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20511..21302)
DNA (792bp) protein (264aa)
Amidohydrolase 2 n=1 Tax=Clostridium sp. CAG:413 RepID=R6NRD6_9CLOT
Amidohydrolase 2 {ECO:0000313|EMBL:CDC08796.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CA
amidohydrolase 2
SCNpilot_BF_INOC_scaffold_2050_26
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21332..23146)
DNA (1815bp) protein (605aa)
GTP-binding protein TypA n=1 Tax=Clostridium sp. CAG:557 RepID=R6GGV3_9CLOT
GTP-binding protein TypA {ECO:0000313|EMBL:CDB23650.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridiu
GTP-binding protein TypA/BipA
SCNpilot_BF_INOC_scaffold_2050_27
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23306..24364
DNA (1059bp) protein (353aa)
Methicillin resistance protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LWE7_9FIRM
Methicillin resistance protein
Methicillin resistance protein {ECO:0000313|EMBL:CDZ23995.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulos
SCNpilot_BF_INOC_scaffold_2050_28
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24361..24891
DNA (531bp) protein (177aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenen
Alanine racemase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U411_ETHHY
SCNpilot_BF_INOC_scaffold_2050_29
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25040..25456
DNA (417bp) protein (139aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostrid
Alanine racemase n=1 Tax=Clostridium sp. CAG:343 RepID=R6P763_9CLOT
SCNpilot_BF_INOC_scaffold_2050_30
unknown

Not on your lists

comp(25496..25750)
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

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