ggKbase home page

SCNpilot_BF_INOC_scaffold_19088_3

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 1576..2292

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein MerR n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DK11_DESRL similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 221.0
  • Bit_score: 395
  • Evalue 3.20e-107
regulatory protein MerR similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 221.0
  • Bit_score: 395
  • Evalue 9.10e-108
Regulatory protein MerR {ECO:0000313|EMBL:AEG60325.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 221.0
  • Bit_score: 395
  • Evalue 4.50e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfotomaculum ruminis → Desulfotomaculum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 717
ATGAAAACTTACAAGACATCCGAAATTGCACATAGCATTGGAATCCATCCCAATACCGTGCGGCTTTATGAAGAACTTGAACTGATTCCCAAACCAGAGCGTAAAGAAAATGGATATCGTGTTTTTACAGATTTTCATATGGAGCAGATTAAATTTGCGAGAATTGCTCTAAAGGTTGAAGTTCTGCAAAATGGTTTAAGGAAACAAGCAATTTCTATTATTAAAGTTTCTGCACTTGGAGATTTCAGCAAAGCAATCTGCTTGACTGAACATTATCTGCAACAAGTTAGAAATGAGCAAAGCAATGCTGAAGAAGCCATTGAGATTACTGAAAAGCTGTTATACGGACATAGTCAGGGAACAGGAACGGCGTTTTTAACCAGAAAAGAAGCGGCCGATTATTTGCAAATCTCAATAGACACATTAAGAAATTGGGAAATGAACGGATTACTTACTGTAAAGAGAAAACAAAATGGATATCGCGTTTATGGTGACGAGGATATTCGGCGTTTGAAAATTATACGCTCCCTGCGCTGTGCAAATTACTCTCTTTCAGCAATTTTGCGAATGCTGAATACTCTATCTCGAAATCCTGAAGCCGACATTCGGCAGGTAATTGACACTCCAAAGAAAAATGAAGATATTATTTCTGTACCTGATAAATGGGAGTTTCCATGGTATGCTTCGTGGGACCTGGCTTTTCACTGNNNNNNATGA
PROTEIN sequence
Length: 239
MKTYKTSEIAHSIGIHPNTVRLYEELELIPKPERKENGYRVFTDFHMEQIKFARIALKVEVLQNGLRKQAISIIKVSALGDFSKAICLTEHYLQQVRNEQSNAEEAIEITEKLLYGHSQGTGTAFLTRKEAADYLQISIDTLRNWEMNGLLTVKRKQNGYRVYGDEDIRRLKIIRSLRCANYSLSAILRMLNTLSRNPEADIRQVIDTPKKNEDIISVPDKWEFPWYASWDLAFHXXX*