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SCNpilot_BF_INOC_scaffold_19088

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_19088_1
Clostridium sp. CAG:609, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..491)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:609 RepID=R7P4G3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF19926.1}; TaxID=1262827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
polar amino acid ABC transporter inner membrane subunit
SCNpilot_BF_INOC_scaffold_19088_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(543..1340)
DNA (798bp) protein (266aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9Q4_9CLOT
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEG31819.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source=
family 3 extracellular solute-binding protein
SCNpilot_BF_INOC_scaffold_19088_3
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1576..2292
DNA (717bp) protein (239aa)
Regulatory protein MerR n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DK11_DESRL
regulatory protein MerR
Regulatory protein MerR {ECO:0000313|EMBL:AEG60325.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (stra
SCNpilot_BF_INOC_scaffold_19088_4
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2255..3115
DNA (861bp) protein (287aa)
ABC transporter related protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DK10_DESRL
ABC transporter-like protein rbh
ABC transporter related protein {ECO:0000313|EMBL:AEG60324.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum rumin
SCNpilot_BF_INOC_scaffold_19088_5
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3102..3833
DNA (732bp) protein (244aa)
ABC-2 type transporter n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DK09_DESRL
ABC transporter rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis
SCNpilot_BF_INOC_scaffold_19088_6
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3978..4307)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D6A7_DESAJ
Protein of unknown function (DUF2680)
Uncharacterized protein {ECO:0000313|EMBL:AFM41331.1}; Flags: Precursor;; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfospo
SCNpilot_BF_INOC_scaffold_19088_7
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4503..4760
DNA (258bp) protein (86aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Desulfitobacterium hafniense RepID=B8FSV6_DESHD
transcriptional regulator
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:EHL05648.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Des
SCNpilot_BF_INOC_scaffold_19088_8
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4767..5957
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZJ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01317.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
Displaying 8 items

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