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SCNpilot_BF_INOC_scaffold_2284_8

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 4193..5080

Top 3 Functional Annotations

Value Algorithm Source
GGPPS1; Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic (EC:2.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 292.0
  • Bit_score: 292
  • Evalue 1.30e-76
Polyprenyl synthetase n=2 Tax=Clostridium RepID=A7VX40_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 286.0
  • Bit_score: 304
  • Evalue 9.30e-80
Polyprenyl synthetase {ECO:0000313|EMBL:EDO60337.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.; similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 286.0
  • Bit_score: 304
  • Evalue 1.30e-79

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Taxonomy

[Clostridium] leptum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 888
ATGAAACCCAATGATATGCTCATTGAATACGCTCCCATCATTGAAGAAGCATTGCAGACTTTTATGCCTGACGATACCTGTCTGCACGGTGAGGTCATCCGGGCAATGAAATACAGCCTCTTGGGAGGCGGCAAGCGGTTAAGACCGGCTTTGGTGCTGGAGTTTTACCGTCTTTGCGGCGGTGATATTGAGGAGGTTCTTCCTTTTGCCTGTGCCGTTGAGATGATCCATACCTATTCGCTGATCCATGATGATTTGCCCTGTATGGATGACGATAGCTTTCGTCGGGGACAACCCACTTGCCACAAGGCATTTTCAGAGGAAATCGCACTGTTGGCGGGAGACGCATTGCTGACACTGGCCTTCAAGACAGCCGCCGGTACTGACAACCCGGCGATCAAACCGGGAAACATTGTCAAAGCAATTGCGGTGCTGGCGGATGCCGCCGGAGTAAACGGTATGATCGGCGGACAAGTGATTGATCTGAAAAGTGAAAACGAATCGGTTTCTCTTTCCGTATTAGAAGAAATCCACAGCAAGAAAACAGGACGCATGTTCAATGTCTGTGCAGAAATCGGATGCCTTCTGGCAGACGCAGAATTTGATAAAAAGCTGAAAGCGGTAGAATATACAAGTAAATTGGGACTTGCTTTTCAGATTAGAGATGATATACTTGATGTAATTGGCGATAAAGCGAAACTGGGCAAAGATATCAACAGTGATATTGAGAACCAAAAAAGCACCTATGTCTCGCTGCTCGGGCTGAAAAAATCCGAAGAGATTGTGAACCGTTTGTCCTCAGAAGCAAAATTCGCGATCGGAGCATTTTCATCTGACAGTATAAGGCTACAAAATTTAGCAGACCGTTTGGCATACAGAGAGGTATAA
PROTEIN sequence
Length: 296
MKPNDMLIEYAPIIEEALQTFMPDDTCLHGEVIRAMKYSLLGGGKRLRPALVLEFYRLCGGDIEEVLPFACAVEMIHTYSLIHDDLPCMDDDSFRRGQPTCHKAFSEEIALLAGDALLTLAFKTAAGTDNPAIKPGNIVKAIAVLADAAGVNGMIGGQVIDLKSENESVSLSVLEEIHSKKTGRMFNVCAEIGCLLADAEFDKKLKAVEYTSKLGLAFQIRDDILDVIGDKAKLGKDINSDIENQKSTYVSLLGLKKSEEIVNRLSSEAKFAIGAFSSDSIRLQNLADRLAYREV*