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SCNpilot_BF_INOC_scaffold_2284

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2284_1
unknown

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comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2284_2
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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284..1255
DNA (972bp) protein (324aa)
Putative thiosulfate sulfurtransferase {ECO:0000313|EMBL:KJJ74640.1}; EC=2.8.1.1 {ECO:0000313|EMBL:KJJ74640.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSY9_9CLOT
hypothetical protein
SCNpilot_BF_INOC_scaffold_2284_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1304..1852
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LSL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61568.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
spoIIIAH; Stage III sporulation protein AH
SCNpilot_BF_INOC_scaffold_2284_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1944..2306
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11466.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17
hypothetical protein
SCNpilot_BF_INOC_scaffold_2284_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2362..2766
DNA (405bp) protein (135aa)
N utilization substance protein B homolog n=1 Tax=Clostridium sp. CAG:352 RepID=R6QTD4_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262798 species="Bacteria; Firm
NusB antitermination factor
SCNpilot_BF_INOC_scaffold_2284_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2763..4004
DNA (1242bp) protein (414aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
xseA; Exodeoxyribonuclease 7 large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. CAG:352 RepID=R6RXK4_9CLOT
SCNpilot_BF_INOC_scaffold_2284_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3994..4206
DNA (213bp) protein (71aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IXV2_9FIRM
SCNpilot_BF_INOC_scaffold_2284_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4193..5080
DNA (888bp) protein (296aa)
GGPPS1; Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic (EC:2.5.1.-)
Polyprenyl synthetase n=2 Tax=Clostridium RepID=A7VX40_9CLOT
Polyprenyl synthetase {ECO:0000313|EMBL:EDO60337.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;
SCNpilot_BF_INOC_scaffold_2284_9
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5095..5565
DNA (471bp) protein (157aa)
Divergent PAP2 family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DCI3_CLOS4
Divergent PAP2 family protein {ECO:0000313|EMBL:ERJ00545.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29
acid phosphatase/vanadium-dependent haloperoxidase related protein
SCNpilot_BF_INOC_scaffold_2284_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5781..7046
DNA (1266bp) protein (422aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VX39_9CLOT
SCNpilot_BF_INOC_scaffold_2284_11
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7068..7661
DNA (594bp) protein (198aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DYS7_9FIRM
deoxyxylulose-5-phosphate synthase
SCNpilot_BF_INOC_scaffold_2284_12
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7639..8445
DNA (807bp) protein (269aa)
Hemolysin TlyA family protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NM96_9FIRM
Hemolysin TlyA family protein {ECO:0000313|EMBL:CDF13811.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubac
hemolysin TlyA family protein
SCNpilot_BF_INOC_scaffold_2284_13
unknown

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8456..8608
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 13 items

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