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SCNpilot_BF_INOC_scaffold_2284_11

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 7068..7661

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose- similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 190.0
  • Bit_score: 191
  • Evalue 1.10e-45
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DYS7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 190.0
  • Bit_score: 190
  • Evalue 1.30e-45
deoxyxylulose-5-phosphate synthase similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 193.0
  • Bit_score: 169
  • Evalue 1.10e-39

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Taxonomy

Ruminococcus sp. CAG:563 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
TTGTTTGATGTTGCCTTCTTAAACTCCATACCCAATATATCGGTGTATTCCCCTTGTACCTATGACGAGCTGATGTATGACATTAAAGCCGCCATTTACAAAGACAGCGGTCCTGTTGCCATCCGTTATCCCAGAGGGTCGCAGCCCTGCTTGCCGAAGGATTATACCTCTTATGATTTGCCTTATATTGTTTACGGTGACGAAACAGCAAAGATTACCATCGTTACCTACGGGCGTCTGTTCAGCAGTGCTGTTAAGGCAATGAAACGTTTGGAAGAGCAAAATATAACGGTAAACATACTGAAGCTGAACAAAATCAAACCCGTCGATCAGGATGCTGTAAACCAAATCCTGTCCTCCTCCCATATTTTCTTTTTTGAAGAGGGCATGGCAATCGGCGGTGTTTCTGAGCATTTCACAGCTCTTCTTGCACAAAAGCGATACAAAGGTGCCGTCAGCATAACAGCAGTGGATAATATTTTTGTCCCTCAGGCAACGGTAGAACGATCCTTGGAGCTGTTGGGGTTGGACGCCGCGGGTATGACGAAAAAAATTCTGGAGGAGACTTCTCTTGAAGAACAATCAAAGGCTTGA
PROTEIN sequence
Length: 198
LFDVAFLNSIPNISVYSPCTYDELMYDIKAAIYKDSGPVAIRYPRGSQPCLPKDYTSYDLPYIVYGDETAKITIVTYGRLFSSAVKAMKRLEEQNITVNILKLNKIKPVDQDAVNQILSSSHIFFFEEGMAIGGVSEHFTALLAQKRYKGAVSITAVDNIFVPQATVERSLELLGLDAAGMTKKILEETSLEEQSKA*