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SCNpilot_BF_INOC_scaffold_2262_11

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 12069..12533

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P8C4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 155.0
  • Bit_score: 148
  • Evalue 5.80e-33
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog {ECO:0000313|EMBL:CCZ05267.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 155.0
  • Bit_score: 148
  • Evalue 8.20e-33
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 154.0
  • Bit_score: 135
  • Evalue 1.10e-29

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Taxonomy

Eubacterium sp. CAG:603 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
ATGTTCAATGATAAAAGCCCTTATAAAATTCGCATTGAAAAAACAAATAACGATAAACATTACTTTGTATCTTTTATTGATGGTCAAAATTCGAGCCAAGAAATAGAAGTTTCTTTCTCAGTGTATCGTGAGATTGAATGCGCCATGAAAGAGGTTCAGCGGCTAAAACGATCAGATCAAAGACATATAGAAAGATTTGAGCTATCCGATGAATTGATTAATAAACGAATGCTTTCTTATCAGAAAGAAGTTGATGAAATAGTCTTTGATATCGGATTAAGTTATGAGCTTAACTTGGCTATTTCTAAATTACCCAAAATACAAAAACGTAGATTTCTCTTATACTACGATAAAAAATTTACATATGAACAAATTGCAAAACTGGAATGCTGTACAAAGCGAGCTGTTAAGTTCAGTGTAGACATCGCAAAAGAAAAAGTTTTAGAAAAAATAAAAAAATTCTAA
PROTEIN sequence
Length: 155
MFNDKSPYKIRIEKTNNDKHYFVSFIDGQNSSQEIEVSFSVYREIECAMKEVQRLKRSDQRHIERFELSDELINKRMLSYQKEVDEIVFDIGLSYELNLAISKLPKIQKRRFLLYYDKKFTYEQIAKLECCTKRAVKFSVDIAKEKVLEKIKKF*