ggKbase home page

SCNpilot_BF_INOC_scaffold_2262

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2262_1
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..480
DNA (480bp) protein (160aa)
Cysteine desulfurase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GJE3_9FIRM
cysteine desulfurase
Cysteine desulfurase {ECO:0000313|EMBL:AHF06057.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireduc
SCNpilot_BF_INOC_scaffold_2262_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(477..1589)
DNA (1113bp) protein (371aa)
DGQHR domain protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HM85_9FIRM
DGQHR domain protein {ECO:0000313|EMBL:CCY30855.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inuli
SCNpilot_BF_INOC_scaffold_2262_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1582..3132)
DNA (1551bp) protein (517aa)
RelA/spoT n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HRR8_9FIRM
RelA/spoT {ECO:0000313|EMBL:CCY30854.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CA
hypothetical protein
SCNpilot_BF_INOC_scaffold_2262_4
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3137..3841)
DNA (705bp) protein (235aa)
HNH endonuclease domain protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G3I0_9CLOT
HNH endonuclease domain protein {ECO:0000313|EMBL:CCY10444.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clo
SCNpilot_BF_INOC_scaffold_2262_5
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3844..6576)
DNA (2733bp) protein (911aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMJ3_9FIRM
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66712.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
SCNpilot_BF_INOC_scaffold_2262_6
unknown

Not on your lists

comp(6615..6812)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2262_7
Leuconostoc kimchii, Leuconostoc, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6799..7797)
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Leuconostoc RepID=D5T495_LEUKI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG41033.1}; TaxID=762051 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Leuconostoc.;" source="Leuconostoc kimchii (strain IMSNU
SCNpilot_BF_INOC_scaffold_2262_8
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7798..10911)
DNA (3114bp) protein (1038aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;"
UvrD/REP helicase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TIK7_9CLOT
UvrD/REP helicase
SCNpilot_BF_INOC_scaffold_2262_9
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10953..11120)
DNA (168bp) protein (56aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24637.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Fic-domain-containing protein id=2859677 bin=GWC2_Spirochaete_52_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
SCNpilot_BF_INOC_scaffold_2262_10
unknown

Not on your lists

11743..12042
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2262_11
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12069..12533
DNA (465bp) protein (155aa)
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P8C4_9FIRM
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog {ECO:0000313|EMBL:CCZ05267.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
SCNpilot_BF_INOC_scaffold_2262_12
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

13441..15075
DNA (1635bp) protein (545aa)
TnpX site-specific recombinase id=3856573 bin=GWF2_Clostridiales_36_10 species=Clostridium bolteae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
recombinase Tax=GWF2_Clostridiales_36_10_curated
recombinase
SCNpilot_BF_INOC_scaffold_2262_13
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15477..15956)
DNA (480bp) protein (160aa)
UPF0272 protein Ethha_0335 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U7Y9_ETHHY
hypothetical protein
UPF0272 protein Ethha_0335 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinens
Displaying 13 items

View Taxonomy