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SCNpilot_BF_INOC_scaffold_2266_10

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(8649..9173)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VYC2_THESW similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 166.0
  • Bit_score: 107
  • Evalue 1.30e-20
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 166.0
  • Bit_score: 107
  • Evalue 3.60e-21
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AFK87517.1}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incer similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 166.0
  • Bit_score: 107
  • Evalue 1.80e-20

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Taxonomy

Thermoanaerobacterium saccharolyticum → Thermoanaerobacterium → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 525
ATGCACATGAACGTTGACAGGGAAACGGATCGGGATTTTATTGAGTTCTATCAAAAATACAACCGAGCTGTATTTTATACTGCCTTACGGATGCTAAAGGATTTTTCGTTGGCAGAGGATATCATGCAGGAGGTTTTCATCCGTCTTCAAAAATCCCTACGGGAAGAGGAAGTCATCACCTATCCCGGTGCATGGCTGATGACAGTTACCAAAAACCTTTGTATCAATCTCATTCATAAAAATGCAAAAGAGCAGGTAACCGAAAGCATTGACACGGTCGTCGCTCCTTATCACGAAAATTTCACCAAAGTGGAGACGGCGGAATACATCAGAAACGTATTACATAAGCTGCCCGAAGAGGAACGGGAAATTTTTGAACTCCATGTTTTGGGCGGGCTGAAGCATGCGGAAATTGCTAAAATGATGGCGATACCGGCTTCCTCCGTCCGTTGGAAGTTTATGAATGCAAGAAAAAAACTGAAAAAAATACTGTCAGGCGAGCAGAAAGGAGGCACAGACAAATGA
PROTEIN sequence
Length: 175
MHMNVDRETDRDFIEFYQKYNRAVFYTALRMLKDFSLAEDIMQEVFIRLQKSLREEEVITYPGAWLMTVTKNLCINLIHKNAKEQVTESIDTVVAPYHENFTKVETAEYIRNVLHKLPEEEREIFELHVLGGLKHAEIAKMMAIPASSVRWKFMNARKKLKKILSGEQKGGTDK*