ggKbase home page

SCNpilot_BF_INOC_scaffold_2270_1

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 1..1581

Top 3 Functional Annotations

Value Algorithm Source
Surface antigen BspA-like n=1 Tax=Trichomonas vaginalis RepID=A2DVL8_TRIVA similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 402.0
  • Bit_score: 203
  • Evalue 4.00e-49
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 500.0
  • Bit_score: 225
  • Evalue 2.80e-56
Fibronectin type III domain {ECO:0000313|EMBL:CBL35292.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V1 similarity UNIPROT
DB: UniProtKB
  • Identity: 30.5
  • Coverage: 453.0
  • Bit_score: 190
  • Evalue 8.40e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Eubacterium] siraeum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1581
ACTAAGAGCAGCCTGCCCGCCAATCCAACCCAAGCGGCGGAGCTGAAAAACACTCTGATGGACTCGGGATCACCGCTGCCACTTCTTCAAAACAAAACAGTCAGCGGAAAAAAGATGAATCTATACAAAGCAGTCAATAAGCTGTCTTCGGCTCCCGACTATGTGTTTGATTCTTCAACAGGAACCATATTAAAATATTTCGGCAATGCACTGGAAATTAATATACCGTCTCAAATCAACAATGTGCCTGTAACCGGGATTGGACAAGGTGCTTTTTCAAAAAGCAGTATCATCAGTGCTGTGATTCCGGCGGGTGTAACCCATATTGACAATAGTGCATTTGAGGGGTGCACACAGTTAAGGTATATTACAATTCCCTCTACAGTGACAACCATAGCGGCATCCGCCTTTGAGAATTGCTATCCGGGTCTTTTGGCTTATGGCGGAAATAATACAACAGCAGAAGTCTTCTGTGGAAATCATAATATCCTGTTTCAGGATACGGATGAGTTCCAGGTAAGCACGAATGCCATTACCGGTTATACCGGATCGGCATCACATATTTACATCCCTCCGGTCATCAACGGCCAAGCGATAACAGCAATATCCAACAACGCTTTCACAGGGAAGCAGATGCAAGCGGTTACTGTTCCCAAGACAGTCACATCCATCGGAACCGGTGCATTCAGCAATTGTGTTTCTCTGGAAAGAGTTGTGATCAACAAAGGAGAGAGCGGGCTGACCATAGGCGCCAGTGCTTTTTCGGGTTGCACGGCGCTGCTTCATATTGAACTGCCCAATAACATAACAGCCATCGGCAACGGAACTTTTTCCGGTTGTCCTGCCGCGCTTATCCTTTATGAAGGAGGCAGCAGCACAATAAAGTCCTATGCGGCGGCAAACCAGCTCAACAGTGTGGATACCGGATTGTTGGAGTTTGATGCGATCACCGGAACAATCGTCAGCTACAAGGGAACAGCAGCATCCTATCGGATCGCCGACAGCCTTGATGACAAGACAATTGTTTTTTTGGAGGATATGGCATTTTCCTATAATAAAACAATCGCGAATCTTATTTTGCCGGATTCTATAACCTCGATTGGTGAAATGGCGTTTGCATATTGCGATTTGTTAAGCGAAATTCAAATACCAAATACAATTGAATTCATCGGTTACGGAGCGTTTGCACTTTGCTATGAACTGGATAACGTGGTTCTTCCCGGCACATTATCTGAGATTGGGGAATACGCATTTTACTTATGCAGTAGTCTTTCTGAAATACACATACCCTCATCCGTATCCATAATCGGGGAGTGTACATTTGCAGGATGCCAAAGTCTTACTGATTTGGCAATAGCCAATGGAGTTGAGACCATTGGTGTTTGGGCCTTTGCTGGATGCTATCGCTTGACAGATATTGATATTCCAGCCAGTGTTGTGGAGTTAAGTTTTGATTTTGTTGAAGACTGCTATAATTTGGAATCTATTAATGTTGACTTTATTCCAGTAGCAATGGCTTGCTGTTTGATAAAAATAAAACAACGGTTTTGCTATGCCCTCTGGGAAAGAGCGGGAACATAA
PROTEIN sequence
Length: 527
TKSSLPANPTQAAELKNTLMDSGSPLPLLQNKTVSGKKMNLYKAVNKLSSAPDYVFDSSTGTILKYFGNALEINIPSQINNVPVTGIGQGAFSKSSIISAVIPAGVTHIDNSAFEGCTQLRYITIPSTVTTIAASAFENCYPGLLAYGGNNTTAEVFCGNHNILFQDTDEFQVSTNAITGYTGSASHIYIPPVINGQAITAISNNAFTGKQMQAVTVPKTVTSIGTGAFSNCVSLERVVINKGESGLTIGASAFSGCTALLHIELPNNITAIGNGTFSGCPAALILYEGGSSTIKSYAAANQLNSVDTGLLEFDAITGTIVSYKGTAASYRIADSLDDKTIVFLEDMAFSYNKTIANLILPDSITSIGEMAFAYCDLLSEIQIPNTIEFIGYGAFALCYELDNVVLPGTLSEIGEYAFYLCSSLSEIHIPSSVSIIGECTFAGCQSLTDLAIANGVETIGVWAFAGCYRLTDIDIPASVVELSFDFVEDCYNLESINVDFIPVAMACCLIKIKQRFCYALWERAGT*